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I4CSJ5

- I4CSJ5_PSEST

UniProt

I4CSJ5 - I4CSJ5_PSEST

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
A458_09030
Organism
Pseudomonas stutzeri CCUG 29243
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSTU1196835:GLIX-1810-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:A458_09030Imported
OrganismiPseudomonas stutzeri CCUG 29243Imported
Taxonomic identifieri1196835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000006063: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4CSJ5-1 [UniParc]FASTAAdd to Basket

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MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLSGGRPRQ    50
LVPTKVLRET AMKVSALPEW LFEESYQAVG DMAETISLLM PEAEHSSDDG 100
LAVWMQDKLL PLRGLPPEEL AERLPALWAQ LDRLSLMVCI KLITGAFRVG 150
VSKLLVTRAL ASLVDLDPKR VAQRLVGYTD LSHRPSAEGY LALIADESEH 200
EHAQRGGQPY PFFLAHPLQA PVEEFDTLLS APENWFVEWK WDGIRAQLVK 250
RDGQIWVWSR GEELVSERFP ELCELASELP DGTVIDGEIL VWKHAPGEPT 300
TNLFEHSDSD DSETTERFGV QSFSLLQQRI GRKNLTAKVL ADAPVAVLAY 350
DLLEWQGDDW RQREHRERRQ QLEAVVGQCP SPQLMLSPLV SGTDWQDLAR 400
QRESSRSLGV EGMMIKARAA QYGVGRTKDV GVWWKWKIDP YFVDAVLIYA 450
QRGHGRRASL YTDYTFAVWD GEPGDPERKL VPFAKAYSGL TDEEMRKVDA 500
IVRKTTVEKF GPVRSVTPTL VFELGFEGIA ASSRHKSGIA VRFPRMLRWR 550
LDKPVDEADT LTTLRELLG 569
Length:569
Mass (Da):64,180
Last modified:September 5, 2012 - v1
Checksum:i4571D320EBD450BF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003677 Genomic DNA. Translation: AFM33052.1.
RefSeqiWP_014820036.1. NC_018028.1.
YP_006457475.1. NC_018028.1.

Genome annotation databases

EnsemblBacteriaiAFM33052; AFM33052; A458_09030.
GeneIDi13146758.
KEGGipsc:A458_09030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003677 Genomic DNA. Translation: AFM33052.1 .
RefSeqi WP_014820036.1. NC_018028.1.
YP_006457475.1. NC_018028.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFM33052 ; AFM33052 ; A458_09030 .
GeneIDi 13146758.
KEGGi psc:A458_09030.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PSTU1196835:GLIX-1810-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)."
    Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.
    J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCUG 29243Imported.

Entry informationi

Entry nameiI4CSJ5_PSEST
AccessioniPrimary (citable) accession number: I4CSJ5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: September 3, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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