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I4CSJ5

- I4CSJ5_PSEST

UniProt

I4CSJ5 - I4CSJ5_PSEST

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

A458_09030

Organism
Pseudomonas stutzeri CCUG 29243
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSTU1196835:GLIX-1810-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:A458_09030Imported
OrganismiPseudomonas stutzeri CCUG 29243Imported
Taxonomic identifieri1196835 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000006063: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4CSJ5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLSGGRPRQ
60 70 80 90 100
LVPTKVLRET AMKVSALPEW LFEESYQAVG DMAETISLLM PEAEHSSDDG
110 120 130 140 150
LAVWMQDKLL PLRGLPPEEL AERLPALWAQ LDRLSLMVCI KLITGAFRVG
160 170 180 190 200
VSKLLVTRAL ASLVDLDPKR VAQRLVGYTD LSHRPSAEGY LALIADESEH
210 220 230 240 250
EHAQRGGQPY PFFLAHPLQA PVEEFDTLLS APENWFVEWK WDGIRAQLVK
260 270 280 290 300
RDGQIWVWSR GEELVSERFP ELCELASELP DGTVIDGEIL VWKHAPGEPT
310 320 330 340 350
TNLFEHSDSD DSETTERFGV QSFSLLQQRI GRKNLTAKVL ADAPVAVLAY
360 370 380 390 400
DLLEWQGDDW RQREHRERRQ QLEAVVGQCP SPQLMLSPLV SGTDWQDLAR
410 420 430 440 450
QRESSRSLGV EGMMIKARAA QYGVGRTKDV GVWWKWKIDP YFVDAVLIYA
460 470 480 490 500
QRGHGRRASL YTDYTFAVWD GEPGDPERKL VPFAKAYSGL TDEEMRKVDA
510 520 530 540 550
IVRKTTVEKF GPVRSVTPTL VFELGFEGIA ASSRHKSGIA VRFPRMLRWR
560
LDKPVDEADT LTTLRELLG
Length:569
Mass (Da):64,180
Last modified:September 5, 2012 - v1
Checksum:i4571D320EBD450BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003677 Genomic DNA. Translation: AFM33052.1.
RefSeqiYP_006457475.1. NC_018028.1.

Genome annotation databases

EnsemblBacteriaiAFM33052; AFM33052; A458_09030.
GeneIDi13146758.
KEGGipsc:A458_09030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003677 Genomic DNA. Translation: AFM33052.1 .
RefSeqi YP_006457475.1. NC_018028.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFM33052 ; AFM33052 ; A458_09030 .
GeneIDi 13146758.
KEGGi psc:A458_09030.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PSTU1196835:GLIX-1810-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)."
    Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.
    J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCUG 29243Imported.

Entry informationi

Entry nameiI4CSJ5_PSEST
AccessioniPrimary (citable) accession number: I4CSJ5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 29, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3