I4CSJ5 (I4CSJ5_PSEST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AFM33052.1
EC=6.5.1.1 EMBL AFM33052.1

Gene names

ORF Names:

A458_09030 EMBL AFM33052.1

Organism

Pseudomonas stutzeri CCUG 29243 EMBL AFM33052.1

Taxonomic identifier

1196835 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas stutzeri group › Pseudomonas stutzeri subgroup › Pseudomonas stutzeri

Protein attributes

Sequence length	569 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFM33052.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I4CSJ5 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: 4571D320EBD450BF	FASTA	569	64,180
	10 20 30 40 50 60 MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLSGGRPRQ LVPTKVLRET 70 80 90 100 110 120 AMKVSALPEW LFEESYQAVG DMAETISLLM PEAEHSSDDG LAVWMQDKLL PLRGLPPEEL 130 140 150 160 170 180 AERLPALWAQ LDRLSLMVCI KLITGAFRVG VSKLLVTRAL ASLVDLDPKR VAQRLVGYTD 190 200 210 220 230 240 LSHRPSAEGY LALIADESEH EHAQRGGQPY PFFLAHPLQA PVEEFDTLLS APENWFVEWK 250 260 270 280 290 300 WDGIRAQLVK RDGQIWVWSR GEELVSERFP ELCELASELP DGTVIDGEIL VWKHAPGEPT 310 320 330 340 350 360 TNLFEHSDSD DSETTERFGV QSFSLLQQRI GRKNLTAKVL ADAPVAVLAY DLLEWQGDDW 370 380 390 400 410 420 RQREHRERRQ QLEAVVGQCP SPQLMLSPLV SGTDWQDLAR QRESSRSLGV EGMMIKARAA 430 440 450 460 470 480 QYGVGRTKDV GVWWKWKIDP YFVDAVLIYA QRGHGRRASL YTDYTFAVWD GEPGDPERKL 490 500 510 520 530 540 VPFAKAYSGL TDEEMRKVDA IVRKTTVEKF GPVRSVTPTL VFELGFEGIA ASSRHKSGIA 550 560 VRFPRMLRWR LDKPVDEADT LTTLRELLG

References

[1]

"Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)." Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R. J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CCUG 29243 EMBL AFM33052.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003677 Genomic DNA. Translation: AFM33052.1.
RefSeq	YP_006457475.1. NC_018028.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFM33052; AFM33052; A458_09030.
GeneID	13146758.
KEGG	psc:A458_09030.
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	PSTU1196835:GLIX-1810-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I4CSJ5_PSEST

Accession

Primary (citable) accession number: I4CSJ5

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	May 29, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)