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I4CSJ5

- I4CSJ5_PSEST

UniProt

I4CSJ5 - I4CSJ5_PSEST

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

A458_09030

Organism
Pseudomonas stutzeri CCUG 29243
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSTU1196835:GLIX-1810-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:A458_09030Imported
    OrganismiPseudomonas stutzeri CCUG 29243Imported
    Taxonomic identifieri1196835 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000006063: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I4CSJ5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLSGGRPRQ    50
    LVPTKVLRET AMKVSALPEW LFEESYQAVG DMAETISLLM PEAEHSSDDG 100
    LAVWMQDKLL PLRGLPPEEL AERLPALWAQ LDRLSLMVCI KLITGAFRVG 150
    VSKLLVTRAL ASLVDLDPKR VAQRLVGYTD LSHRPSAEGY LALIADESEH 200
    EHAQRGGQPY PFFLAHPLQA PVEEFDTLLS APENWFVEWK WDGIRAQLVK 250
    RDGQIWVWSR GEELVSERFP ELCELASELP DGTVIDGEIL VWKHAPGEPT 300
    TNLFEHSDSD DSETTERFGV QSFSLLQQRI GRKNLTAKVL ADAPVAVLAY 350
    DLLEWQGDDW RQREHRERRQ QLEAVVGQCP SPQLMLSPLV SGTDWQDLAR 400
    QRESSRSLGV EGMMIKARAA QYGVGRTKDV GVWWKWKIDP YFVDAVLIYA 450
    QRGHGRRASL YTDYTFAVWD GEPGDPERKL VPFAKAYSGL TDEEMRKVDA 500
    IVRKTTVEKF GPVRSVTPTL VFELGFEGIA ASSRHKSGIA VRFPRMLRWR 550
    LDKPVDEADT LTTLRELLG 569
    Length:569
    Mass (Da):64,180
    Last modified:September 5, 2012 - v1
    Checksum:i4571D320EBD450BF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003677 Genomic DNA. Translation: AFM33052.1.
    RefSeqiWP_014820036.1. NC_018028.1.
    YP_006457475.1. NC_018028.1.

    Genome annotation databases

    EnsemblBacteriaiAFM33052; AFM33052; A458_09030.
    GeneIDi13146758.
    KEGGipsc:A458_09030.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003677 Genomic DNA. Translation: AFM33052.1 .
    RefSeqi WP_014820036.1. NC_018028.1.
    YP_006457475.1. NC_018028.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFM33052 ; AFM33052 ; A458_09030 .
    GeneIDi 13146758.
    KEGGi psc:A458_09030.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PSTU1196835:GLIX-1810-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)."
      Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B., Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.
      J. Bacteriol. 194:6642-6643(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCUG 29243Imported.

    Entry informationi

    Entry nameiI4CSJ5_PSEST
    AccessioniPrimary (citable) accession number: I4CSJ5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3