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I4C4C0 (I4C4C0_DESTA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.3.2.10 EMBL AFM24411.1
Gene names
Ordered Locus Names:Desti_1700 EMBL AFM24411.1
OrganismDesulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) [Complete proteome] [HAMAP] EMBL AFM24411.1
Taxonomic identifier706587 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaSyntrophobacteralesSyntrophaceaeDesulfomonile

Protein attributes

Sequence length871 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS001608

Sequences

Sequence LengthMass (Da)Tools
I4C4C0 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: F513B2A430A6A3A4

FASTA87195,148
        10         20         30         40         50         60 
MISETTKNST PIADAECVDP VSACARSNSV EKQGIANTGF LDLSELIGIL KPIRVQGPLA 

        70         80         90        100        110        120 
GPISGISIDT RKPMSEDFIF WAIRGEHFNG NDFVEDALSA GARAVVASRD DCFQNGSWPD 

       130        140        150        160        170        180 
ATLIQVQDTL QALQDLAATY RNRFRYPVIG ITGSNGKTLV KEMLASILCL ERKTYRSPLS 

       190        200        210        220        230        240 
YNTQIGAALG LLGMRPEHQV AIIEAGISLP GEMDRLERMI RPDHGILTII SKAHIGGLGT 

       250        260        270        280        290        300 
LENTIAEKRR LFKNLKEDSF LVLNADDPLS MELAQDSKAR VVTFGMSPQA DVRAENITSI 

       310        320        330        340        350        360 
PDRGHQFIMQ IFGNAQQIML PVAGRFNVLN ALAASAAATL LGASPEAIAE GLKDFRPSPM 

       370        380        390        400        410        420 
RLEMHTTVTG VTLINDTYNS DPVSVKGALD VLAKVGKGRR KIAILSEMLD LGLHSREEHL 

       430        440        450        460        470        480 
AVGKEVVRSQ VDQLITVGEN AAIIGHAAAT EGMNPKRITH TRSHKEAALE LEKIMNRGDV 

       490        500        510        520        530        540 
VLFKGSRWFR LERIAKELVG SIGATRLLVN LDAIAANVKK IRGIVGEDVA IMSVVKSFGY 

       550        560        570        580        590        600 
GNDSIRTSRV ALENGANYLA VAFPDEGTTL RENRIDAPIL VFNVLPEEVD KIIKHDLSCV 

       610        620        630        640        650        660 
VASLETAAAL DRAATGRRKI PVHVKIDTGM GRSGIWVEDA VPFIEQVLCF RNLAVEGIMT 

       670        680        690        700        710        720 
HFSSADDPAS DDYTLQQITA FEALLSELKQ RGHSFRYIHA ANTSALVRFP QTHYTMVRPG 

       730        740        750        760        770        780 
LAIYGMYPSE AVKSYIQLEQ VIAFTTKIAQ LKEHPPGRCI SYNRRYVTSR NCRIATLHVG 

       790        800        810        820        830        840 
YNDGYPRFQS NVGEVLVHGK RAPVVGTVCM DTIMIDVTEI PEARVGDEVV LIGKQGDEEI 

       850        860        870 
LPDDIAANGN TINYEIACKI SPRVTRIFVQ S 

« Hide

References

[1]"Complete sequence of chromosome of Desulfomonile tiedjei DSM 6799."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Zeytun A., Lu M., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C. expand/collapse author list , Han C., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49306 / DSM 6799 / DCB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003360 Genomic DNA. Translation: AFM24411.1.
RefSeqYP_006446675.1. NC_018025.1.

3D structure databases

ProteinModelPortalI4C4C0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM24411; AFM24411; Desti_1700.
GeneID13138745.
KEGGdti:Desti_1700.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAMHENASI.

Enzyme and pathway databases

BioCycDTIE706587:GLCI-1698-MONOMER.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
3.40.1190.10. 1 hit.
3.40.1390.10. 1 hit.
3.90.190.20. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR004101. Mur_ligase_C.
IPR013221. Mur_ligase_cen.
IPR000713. Mur_ligase_N.
IPR029066. PLP-binding_barrel.
IPR005863. UDP-N-AcMur-pentapeptide_synth.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
PF01225. Mur_ligase. 1 hit.
PF02875. Mur_ligase_C. 1 hit.
PF08245. Mur_ligase_M. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
SSF53244. SSF53244. 1 hit.
SSF53623. SSF53623. 1 hit.
SSF63418. SSF63418. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
TIGR01143. murF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI4C4C0_DESTA
AccessionPrimary (citable) accession number: I4C4C0
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 11, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)