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I4BF37 (I4BF37_MYCCN) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glutamate decarboxylase EMBL AFM15894.1
EC=4.1.1.15 EMBL AFM15894.1
Gene names
Ordered Locus Names:Mycch_1085 EMBL AFM15894.1
OrganismMycobacterium chubuense (strain NBB4) [Complete proteome] [HAMAP] EMBL AFM15894.1
Taxonomic identifier710421 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium ›

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL AFM15894.1
Chain26 – 467442 Potential EMBL AFM15894.1
PRO_5000912752

Sequences

Sequence LengthMass (Da)Tools
I4BF37 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: F38F4DFE3138ADDB

FASTA46751,782
        10         20         30         40         50         60 
MPNVSRHTSL TPAYTGRMFT SPIPALRLPD ESMDPEQAYR FIHDELMLDG SSRLNLATFV 

        70         80         90        100        110        120 
TTWMDPEAGQ LMSETFDKNM IDKDEYPVTA AIEQRCVCMV ADLFHAEHLR DDDPSTAIGV 

       130        140        150        160        170        180 
STIGSSEAVM LAGLALKWRW RQKLEAAGQD WKGRTPNLVM GSNVQVVWEK FCRYFDVEAR 

       190        200        210        220        230        240 
YLPMDKGRYV ITPEQVVDAV DEDTIGVVAI LGTTFTGELE PVGEICAALD TLARGDGPDV 

       250        260        270        280        290        300 
PVHVDAASGG FVVPFLHPDM VWDFRLPRVV SINVSGHKYG LTYPGIGFVV WRNADHLPEE 

       310        320        330        340        350        360 
LVFRVNYLGG DMPTFTLNFS RPGNQVVGQY YNFLRLGRDG YMSVMHCLSD TAQWLARELA 

       370        380        390        400        410        420 
GMSGPDNTPV FDVISDGSAI PVVAFKLVEG TKFTVFDVSA LLRSYGWQVP AYTMPDHASD 

       430        440        450        460 
IAVLRIVVRE GFSANLARAL RDDLVEVLGK LERTGVAGFS DEEHFAH

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References

[1]"Complete sequence of chromosome of Mycobacterium chubuense NBB4."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T. expand/collapse author list , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBB4 EMBL AFM15894.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003053 Genomic DNA. Translation: AFM15894.1.
RefSeqYP_006451573.1. NC_018027.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM15894; AFM15894; Mycch_1085.
GeneID13141276.
KEGGmcb:Mycch_1085.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI4BF37_MYCCN
AccessionPrimary (citable) accession number: I4BF37
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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