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I4BDH3

- I4BDH3_MYCCN

UniProt

I4BDH3 - I4BDH3_MYCCN

Protein

Superoxide dismutase [Cu-Zn]

Gene

Mycch_0510

Organism
Mycobacterium chubuense (strain NBB4)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciMCHU710421:GLGL-510-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Mycch_0510Imported
    OrganismiMycobacterium chubuense (strain NBB4)Imported
    Taxonomic identifieri710421 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000006057: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2929 PotentialImportedAdd
    BLAST
    Chaini30 – 266237 PotentialImportedPRO_5000912635Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    I4BDH3-1 [UniParc]FASTAAdd to Basket

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    MIRTVAAVTL FAAPALALTA CSPPGEVPAN SPGTPPPVWT GSPSPSSSMG    50
    EQGAGEQGGV RQGGLAGVPQ EGGAQGRAGQ VGGNQSAPQQ AQSGGESLKA 100
    DLKLADGTTV ASADIAFSGG YATVTVRTTA AGKLAPGFHG MHIHSVGKCE 150
    PNSVAPTGGA PGNFNSAGGH LQVGGRSDHP ASGDLASLQV RGDGSAELVT 200
    TTDAFTAQDL LNGAGTAIIV HEKADNFANI PADRYRQLDG APPPDQNTLA 250
    TGDAGARVAC GVITRG 266
    Length:266
    Mass (Da):26,091
    Last modified:September 5, 2012 - v1
    Checksum:i3C62D34BB7DCCA5A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003053 Genomic DNA. Translation: AFM15330.1.
    RefSeqiWP_014813822.1. NC_018027.1.
    YP_006451009.1. NC_018027.1.

    Genome annotation databases

    EnsemblBacteriaiAFM15330; AFM15330; Mycch_0510.
    GeneIDi13143645.
    KEGGimcb:Mycch_0510.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003053 Genomic DNA. Translation: AFM15330.1 .
    RefSeqi WP_014813822.1. NC_018027.1.
    YP_006451009.1. NC_018027.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFM15330 ; AFM15330 ; Mycch_0510 .
    GeneIDi 13143645.
    KEGGi mcb:Mycch_0510.

    Phylogenomic databases

    KOi K04565.

    Enzyme and pathway databases

    BioCyci MCHU710421:GLGL-510-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Mycobacterium chubuense NBB4."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T.
      , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T.
      Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBB4Imported.

    Entry informationi

    Entry nameiI4BDH3_MYCCN
    AccessioniPrimary (citable) accession number: I4BDH3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3