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Protein
Submitted name:

4-aminobutyrate aminotransferase family protein

Gene

Mycch_0034

Organism
Mycobacterium chubuense (strain NBB4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMCHU710421:GLGL-34-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferase family proteinImported
Gene namesi
Ordered Locus Names:Mycch_0034Imported
OrganismiMycobacterium chubuense (strain NBB4)Imported
Taxonomic identifieri710421 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000006057 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI4BC55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4BC55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTLYARDDA VIAGIEKLRF FPLEVQSGHG CILTTPDGRE LLDLSATWTA
60 70 80 90 100
SGLGHGHPAV VEAVCRAVRD APGSGGLSAV HPDSVGLAED LLALVPGEGE
110 120 130 140 150
RRVYLGHAGS DANDVALRAC RHATGRRTVV AFEHSYHGGV GVAMGVSGVH
160 170 180 190 200
VDAGAPADPD SVFLPYPNPF RPGPDGVEAD VAVCLELADR QLADGRAACL
210 220 230 240 250
IVEPILSDGG LVVPPDGFLA RLQELCRRHG VPMICDEVKM GLGRPGTLHA
260 270 280 290 300
FEHDGVVPDI VTFGKVIGGG LPLSAAVGPA AILDNPPAAA LLTTAGNPVC
310 320 330 340 350
TAAGRAVLKT IVSEGLVENT AKVGALLADS LRELTGSTGG DRIGDVRGRG
360 370 380 390 400
LAIGLELVDP ETGDRDPRLA AAVVYRAWEL GAVVYYVGGN VLEITPPLVL
410 420 430
TEAQAAQAAE ILGAAIGDAA AGRVDAEEVA KYAGW
Length:435
Mass (Da):44,585
Last modified:September 5, 2012 - v1
Checksum:i27E038FF953FA52E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003053 Genomic DNA. Translation: AFM14862.1.
RefSeqiWP_014813354.1. NC_018027.1.
YP_006450541.1. NC_018027.1.

Genome annotation databases

EnsemblBacteriaiAFM14862; AFM14862; Mycch_0034.
KEGGimcb:Mycch_0034.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003053 Genomic DNA. Translation: AFM14862.1.
RefSeqiWP_014813354.1. NC_018027.1.
YP_006450541.1. NC_018027.1.

3D structure databases

ProteinModelPortaliI4BC55.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFM14862; AFM14862; Mycch_0034.
KEGGimcb:Mycch_0034.

Phylogenomic databases

KOiK00823.

Enzyme and pathway databases

BioCyciMCHU710421:GLGL-34-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Mycobacterium chubuense NBB4."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T.
    , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T.
    Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBB4Imported.

Entry informationi

Entry nameiI4BC55_MYCCN
AccessioniPrimary (citable) accession number: I4BC55
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: May 27, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.