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I4B7D0 (I4B7D0_TURPD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length401 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding83 – 875GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding138 – 1414GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
I4B7D0 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: DCBF854905307319

FASTA40143,577
        10         20         30         40         50         60 
MAKEKFDRSK PHVNVGTIGH VDHGKTTLTA AITTVLANKF GGKNKAVSYA EIDNAPEERA 

        70         80         90        100        110        120 
RGITIATSHQ EYETANRHYA HVDCPGHADY VKNMITGAAQ MDAAILVVSA VDGPMPQTRE 

       130        140        150        160        170        180 
HILLAKQVGV PQIVVFLNKV DMLPEGDRAE MQELVEMEVR DLLTKYGFPG GEIPFVPGSA 

       190        200        210        220        230        240 
LKAVEGDTSD LGEGAILKLA ETLDSYVKDP VRVVDKPFLM PVEDVFSITG RGTVCTGRVE 

       250        260        270        280        290        300 
RGKVNVNEEI EIVGIRDTQK TIVTGIEMFR KLLDFGQAGD NVGLLLRGTK KEDVERGQVI 

       310        320        330        340        350        360 
VKPGSVKPHK KFSGEVLVLT KDEGGRHTPF FDKYRPQFYF RTTDVTGTVN LPTGVEMVNP 

       370        380        390        400 
GDNVTITAEL ISPIAMEEGL RFAIREGGRT IGAGVVGTIL E 

« Hide

References

[1]"The complete chromosome of genome of Turneriella parva DSM 21527."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. expand/collapse author list , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002959 Genomic DNA. Translation: AFM13187.1.
RefSeqYP_006440693.1. NC_018020.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM13187; AFM13187; Turpa_2547.
GeneID13129383.
KEGGtpx:Turpa_2547.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycTPAR869212:GLMM-2536-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI4B7D0_TURPD
AccessionPrimary (citable) accession number: I4B7D0
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 16, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)