I4B751 (I4B751_TURPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Turpa_2466 EMBL AFM13108.1

Organism

Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) (Leptospira parva) [Complete proteome] [HAMAP] EMBL AFM13108.1

Taxonomic identifier

869212 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Spirochaetes › Spirochaetia › Spirochaetales › Leptospiraceae › Turneriella › Turneriella parva

Protein attributes

Sequence length	374 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I4B751 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: 1A19486AAADDBBE9	FASTA	374	41,463
	10 20 30 40 50 60 MIDSTQTNHD SAPPVTLRIH ADALRHNLAR FRQLAPRSKI LLPVKANAYG CGLQTLFPVF 70 80 90 100 110 120 QKNDVDVLGV ANCNEAVELR ALGWQKPVLN LGGFFRGNIQ SILDHQISAS ITDLWQVNEL 130 140 150 160 170 180 NAAASGATVR VHLKLDLGMG RIGIRQNELP DLVSALKAAP NLQIDGMFTH FPHSGPEAAP 190 200 210 220 230 240 FTLAQNENFV RISHELINEL QLERGSVTLH AANSYSAAFF SQTHHDMIRP GILFYGYYQS 250 260 270 280 290 300 ESDRVQFNER FGFRPALELV ATPISVRTLR RGDGISYASL YHVTEEQETV AVLPLGYADG 310 320 330 340 350 360 IPRALSNQIT FGRHPLRGRV TMDQIILGNA EGTSPIRLLG EGLPSLEYWG ELSHSFSYEL 370 MSHLGNRIQR VLVD

References

[1]

"The complete chromosome of genome of Turneriella parva DSM 21527." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002959 Genomic DNA. Translation: AFM13108.1.
RefSeq	YP_006440614.1. NC_018020.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFM13108; AFM13108; Turpa_2466.
GeneID	13130972.
KEGG	tpx:Turpa_2466.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I4B751_TURPD

Accession

Primary (citable) accession number: I4B751

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)