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Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Corynebacterium pseudotuberculosis Cp162
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciCPSE1161911:GLBY-627-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
ORF Names:Cp162_0607Imported
OrganismiCorynebacterium pseudotuberculosis Cp162Imported
Taxonomic identifieri1161911 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium
ProteomesiUP000006065: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I4ASN3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRTLALRAA VALVGVSSIA VLSACSSSTT TKDSADKAMT SAASTASNSH
60 70 80 90 100
AFATAELKNQ SGEGVGMVEF SKTAAGTKIT VDAKGLTPGF HGFHVHDKGV
110 120 130 140 150
CEGNFKSAGG HLHGKNQPHG DGYHPHAGDL PSLLANADGT AHLEVVTDAV
160 170 180 190 200
DEDLLFGADG TSLIVHEGRD NYANIPQRYA PNGPDEETLK TGDAGARFAC

GVITKK
Length:206
Mass (Da):21,099
Last modified:September 5, 2012 - v1
Checksum:i31B1D67B3B1FDB9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003652 Genomic DNA. Translation: AFM06968.1.
RefSeqiYP_006436761.1. NC_018019.1.

Genome annotation databases

EnsemblBacteriaiAFM06968; AFM06968; Cp162_0607.
GeneIDi13125938.
KEGGicou:Cp162_0607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003652 Genomic DNA. Translation: AFM06968.1.
RefSeqiYP_006436761.1. NC_018019.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFM06968; AFM06968; Cp162_0607.
GeneIDi13125938.
KEGGicou:Cp162_0607.

Phylogenomic databases

KOiK04565.

Enzyme and pathway databases

BioCyciCPSE1161911:GLBY-627-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Cp162Imported.

Entry informationi

Entry nameiI4ASN3_CORPS
AccessioniPrimary (citable) accession number: I4ASN3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 7, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.