I4AH93 (I4AH93_FLELS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Fleli_0871 EMBL AFM03328.1

Organism

Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) [Complete proteome] [HAMAP] EMBL AFM03328.1

Taxonomic identifier

880071 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Flexibacter › Flexibacter litoralis

Protein attributes

Sequence length	386 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I4AH93 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: B9C5A05C1D6A57B0	FASTA	386	43,751
	10 20 30 40 50 60 MFSTSHIEIS KSALQNNYHF LRQLIGENVT LSSVVKGNAY GHGLENFIPL AESCGASHFS 70 80 90 100 110 120 VFSADEAFEV QKLKKENSQI MILGMIGNEE LEWAIRTSIE VYMFDLERLE VGLQIAQKMQ 130 140 150 160 170 180 MPIKIHLEME TGMNRIGIAK KDIPKVFQLL TNYPNCYILE GISTHYAGAE SIANYVRVKQ 190 200 210 220 230 240 QIINYKKIVK RFQRKENPAF IPKKYHTACS AATIAYPQTR MDMVRIGILQ YGFFPTQETL 250 260 270 280 290 300 IQYLKDNKTH IDPLKRVLSW KSKIMTIKDV EAGEFIGYGT SFLASQKMKI AIVPVGYAHG 310 320 330 340 350 360 YSRSLSNMGR VLVRGERMAV VGVVNMNLMI IDLEKMQSAE IGDEVILIGK QGEQEVSVAS 370 380 FSEMSNQLNY ELLTRLPMNI PRKIVE

References

[1]

"The complete genome of Flexibacter litoralis DSM 6794." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Lang E., Kopitz M., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003345 Genomic DNA. Translation: AFM03328.1.
RefSeq	YP_006433121.1. NC_018018.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFM03328; AFM03328; Fleli_0871.
GeneID	13122688.
KEGG	fli:Fleli_0871.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I4AH93_FLELS

Accession

Primary (citable) accession number: I4AH93

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)