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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

CL1_1040

Organism
Thermococcus sp. CL1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTSP163003:GLMB-1068-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
ORF Names:CL1_1040Imported
OrganismiThermococcus sp. CL1Imported
Taxonomic identifieri163003 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000006064 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I3ZU59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRGILAALV IALVVLSVSA VPAKAETLEN GGVIMQAFYW DVPGGGIWWD
60 70 80 90 100
TIAQKIPDWA SAGISAIWIP PASKGMSGGY SMGYDPYDYF DLGEYYQKGT
110 120 130 140 150
VETRFGSKAE LVNMINTAHA YNMKVIADIV INHRAGGDLE WNPFVNDYTW
160 170 180 190 200
TDFSKVASGK YTANYLDFHP NELHAGDSGT FGGYPDICHD KSWDQYWLWA
210 220 230 240 250
SQESYAAYLR SIGVDAWRFD YVKGYAPWVV KDWLSWWGGW AVGEYWDTNV
260 270 280 290 300
DALLSWAYDS GAKVFDFPLY YKMDEAFDNQ NIPALVDALR NGGTVVSRDP
310 320 330 340 350
FKAVTFVANH DTDIIWNKYP AYAFILTYEG QPVIFYRDYE EWLNKDRLKN
360 370 380 390 400
LIWIHDHLAG GSTDIVYYDS DELIFVRNGY GDKPGLITYI NLGSSKAGRW
410 420 430 440 450
VYVPKFAGSC IHEYTGNLGG WVDKYVSSSG WVYLEAPAHD PANGYYGYSV

WSYCGVG
Length:457
Mass (Da):51,509
Last modified:September 5, 2012 - v1
Checksum:i27A2C28384DDB3C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003651 Genomic DNA. Translation: AFL95243.1.
RefSeqiWP_014788878.1. NC_018015.1.
YP_006425037.1. NC_018015.1.

Genome annotation databases

EnsemblBacteriaiAFL95243; AFL95243; CL1_1040.
GeneIDi13037427.
KEGGithm:CL1_1040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003651 Genomic DNA. Translation: AFL95243.1.
RefSeqiWP_014788878.1. NC_018015.1.
YP_006425037.1. NC_018015.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL95243; AFL95243; CL1_1040.
GeneIDi13037427.
KEGGithm:CL1_1040.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciTSP163003:GLMB-1068-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp. Strain CL1, Isolated from a Paralvinella sp. Polychaete Worm Collected from a Hydrothermal Vent."
    Jung J.H., Holden J.F., Seo D.H., Park K.H., Shin H., Ryu S., Lee J.H., Park C.S.
    J. Bacteriol. 194:4769-4770(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiI3ZU59_9EURY
AccessioniPrimary (citable) accession number: I3ZU59
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 7, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.