I3ZL31 (I3ZL31_TERRK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118
Ordered Locus Names:	Terro_0908 EMBL AFL87234.1, Terro_3738 EMBL AFL89949.1

Organism

Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) [Complete proteome] [HAMAP] EMBL AFL89949.1

Taxonomic identifier

926566 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fibrobacteres/Acidobacteria group › Acidobacteria › Acidobacteriia › Acidobacteriales › Acidobacteriaceae › Terriglobus › Terriglobus roseus

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding RuleBase RU000323 HAMAP-Rule MF_00118 Nucleotide-binding
Molecular function	Elongation factor RuleBase RU000325 HAMAP-Rule MF_00118 EMBL AFL89949.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	82 – 86	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	137 – 140	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	I3ZL31 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: CEDBB9B6792589BB	FASTA	395	43,163
	10 20 30 40 50 60 MGKEKFDRSK PHVNVGTIGH IDHGKTTLTA AITKVLSKHN PKNSFRSFDT IDNAPEERER 70 80 90 100 110 120 GITIATSHVE YETANRHYAH VDCPGHADYI KNMITGAAQM DGAILVVAAT DGPMPQTKEH 130 140 150 160 170 180 VLLARQVGVP YIVVFLNKCD AVEDEELIDL VEMEVRELLS KYDFPGDDVP VIRGSALGAL 190 200 210 220 230 240 NGEAQWEAKI DELMDAVDKN VPQPDRLVDL PFLMPIEDIF SISGRGTVVT GRIERGKIKV 250 260 270 280 290 300 GEPAQIVGFR DTQNTTVTGV EMFKKQLDEG LAGDNAGLLL RGTAKDDVER GMVLAKPGSI 310 320 330 340 350 360 TPHTTFKGEI YVLSKEEGGR HTPFFDGYRP QFYFRTTDVT GSAKLPAGTE MVMPGDNIAL 370 380 390 EITLHTPVAM EKGLRFAIRE GGRTVGAGTI SEIIK

References

[1]

"Complete genome of Terriglobus roseus DSM 18391." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Munk A.C.C., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18391 EMBL AFL89949.1 and DSM 18391 / NRRL B-41598 / KBS 63.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003379 Genomic DNA. Translation: AFL87234.1. CP003379 Genomic DNA. Translation: AFL89949.1.
RefSeq	YP_006420569.1. NC_018014.1. YP_006423284.1. NC_018014.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFL87234; AFL87234; Terro_0908. AFL89949; AFL89949; Terro_3738.
GeneID	13039671. 13041798.
KEGG	trs:Terro_0908. trs:Terro_3738.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02358.
Family and domain databases
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I3ZL31_TERRK

Accession

Primary (citable) accession number: I3ZL31

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)