I3ZBS5 (I3ZBS5_TERRK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AFL86693.1

Gene names

Ordered Locus Names:

Terro_0344 EMBL AFL86693.1

Organism

Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) [Complete proteome] [HAMAP] EMBL AFL86693.1

Taxonomic identifier

926566 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fibrobacteres/Acidobacteria group › Acidobacteria › Acidobacteriia › Acidobacteriales › Acidobacteriaceae › Terriglobus › Terriglobus roseus

Protein attributes

Sequence length	359 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFL86693.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I3ZBS5 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: 76E519AE50CFD4B9	FASTA	359	40,322
	10 20 30 40 50 60 MSLPLPSPIL PMLAKRVDAI PSAGGWSFEP KWDGFRAVIF RSGDELLIQS RDGKPLDRYF 70 80 90 100 110 120 PELREPLLQQ LPQQCVLDGE IVIQRAGGLD FDALSLRIHP AASRVKTLAA QMPASVVFFD 130 140 150 160 170 180 LLHVDDRDLR DAPFHERRAE LERVLANADT PLHITPATQD QTVAQDWFTR FEGAGLDGVM 190 200 210 220 230 240 AKPLEGPYTP DKRTMLKVKH ERDCDCVVAG FRWHKDGEGT AVGSLLLGLY NDAGALQHVG 250 260 270 280 290 300 VCSSFTAAKR KELVEFLAPY REDAVTNHPW ANWADEAAQA SGRMPGGQSR WSNGKDLSWQ 310 320 330 340 350 LLRIELVVEV AYEHMQGDRF RHLAHFRRWR PDKPVAQCTY AQLEVVSPQE LKMIFPAGR

References

[1]

"Complete genome of Terriglobus roseus DSM 18391." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Munk A.C.C., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18391 / NRRL B-41598 / KBS 63.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003379 Genomic DNA. Translation: AFL86693.1.
RefSeq	YP_006420028.1. NC_018014.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFL86693; AFL86693; Terro_0344.
GeneID	13039244.
KEGG	trs:Terro_0344.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I3ZBS5_TERRK

Accession

Primary (citable) accession number: I3ZBS5

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)