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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Belba_2946

Organism
Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBBAL866536:GL8V-2945-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Belba_2946Imported
OrganismiBelliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134)Imported
Taxonomic identifieri866536 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeBelliella
ProteomesiUP000006050: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3Z8A8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFTELFSS LDQSNKTSDK LSALELYFRK ASDLDKLWTL ALFTHKKPKR
60 70 80 90 100
AVTTKELRAW CIELAQIPEW LFEESYQTVG DLAETIALLL PNSKTKSDFS
110 120 130 140 150
LAYWIRFLKD LKDLPEDTKK SSLLNAWLIL DKQERFVFNK IITGGFRVGV
160 170 180 190 200
SQNLITQALA NVFEMEKTEV AHRLMGNWTP ENISFEKLIL AKNFADDLSR
210 220 230 240 250
PYPFYLAYPL EDNLESLGEI EDWQIEWKWD GIRGQIIQRA NEVFIWSRGE
260 270 280 290 300
ELVTEKFPEL IEFSSKLPRG TVLDGEIIAY KDGKPLPFSL LQTRIGRKTV
310 320 330 340 350
SKKLLLDAPV GFICYDILEF EGNDIRVKPM FERRKILEQI DKEIMASNFQ
360 370 380 390 400
ISPFVKVQTW QEAIILQKTS RSMLAEGFML KKKTSPYEVG RKRGNWWKWK
410 420 430 440 450
IEPLTIDGVV LYAQKGHGRR ANLYSDYTLA VWENDKLVPF AKAYSGLTDA
460 470 480 490 500
EIKEVDQYVK KNTLERFGPV RTVKPALVFE IAFEGIQESP RHKSGIALRF
510 520 530
PRIQRWRKDK PIEEANNLED LKALLSIYGG
Length:530
Mass (Da):61,444
Last modified:September 5, 2012 - v1
Checksum:i655376B16107B385
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003281 Genomic DNA. Translation: AFL85476.1.
RefSeqiYP_006408231.1. NC_018010.1.

Genome annotation databases

EnsemblBacteriaiAFL85476; AFL85476; Belba_2946.
GeneIDi13056774.
KEGGibbd:Belba_2946.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003281 Genomic DNA. Translation: AFL85476.1.
RefSeqiYP_006408231.1. NC_018010.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL85476; AFL85476; Belba_2946.
GeneIDi13056774.
KEGGibbd:Belba_2946.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciBBAL866536:GL8V-2945-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15883 / CIP 108006 / LMG 21964 / BA134Imported.

Entry informationi

Entry nameiI3Z8A8_BELBD
AccessioniPrimary (citable) accession number: I3Z8A8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: March 4, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.