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I3YUI4

- I3YUI4_AEQSU

UniProt

I3YUI4 - I3YUI4_AEQSU

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Aeqsu_1156

Organism
Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciASUB746697:GL7Y-1156-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Aeqsu_1156Imported
    OrganismiAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)Imported
    Taxonomic identifieri746697 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeAequorivita
    ProteomesiUP000006049: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I3YUI4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKDFAQLIKK LDSTNKTNEK VAALTAYFQN ANDDDKLWTI AILSHRRPKR    50
    PVNTTLLRLW ATEISGIPLW LFEESYHIVG DLAETIALIL PTSEEHSEKS 100
    LSTFVSEIIA LRTLPEEEKK KYLHYNWLAL NYFERFVFNK ILTGSFRIGV 150
    SQKLMTRALS KATAIDEDIL AYKLMGDWTP EKTTFQKLIL EENPEDYLSK 200
    PYPFYLAYAV EADFQKDLGA ISDWSFEHKW DGIRSQVIIR NDEVFVWSRG 250
    EELVTDKYPE FQRFLSAIPN GTVIDGEILP FGAGEIGNFN ALQTRIGRKN 300
    ISKALLKKTP VILNAYDLLE WQGEDIRQKP FSERRKILDE LIQKINSEEV 350
    GIYLSETMNF ETWEEAAEER KLSREKRSEG LMLKRKDSPY LVGRKKGDWW 400
    KWKIDPFTID AVLTYAMRGH GRRANLYTDY TFGLWNDGEL VTFAKAYSGL 450
    TDAEFRQVDA WIKRNTLERF GPVRSVTPHH VFEIAFEGIA ESSRHKSGIA 500
    TRFPRILRWR KDKPIAEANT LDDLKALIPK 530
    Length:530
    Mass (Da):61,454
    Last modified:September 5, 2012 - v1
    Checksum:i3D678C1D4DD2C3FF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003280 Genomic DNA. Translation: AFL80652.1.
    RefSeqiWP_014781910.1. NC_018013.1.
    YP_006417667.1. NC_018013.1.

    Genome annotation databases

    EnsemblBacteriaiAFL80652; AFL80652; Aeqsu_1156.
    GeneIDi13044541.
    KEGGiasl:Aeqsu_1156.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003280 Genomic DNA. Translation: AFL80652.1 .
    RefSeqi WP_014781910.1. NC_018013.1.
    YP_006417667.1. NC_018013.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFL80652 ; AFL80652 ; Aeqsu_1156 .
    GeneIDi 13044541.
    KEGGi asl:Aeqsu_1156.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci ASUB746697:GL7Y-1156-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 14238 / LMG 21431 / ACAM 643 / 9-3Imported.

    Entry informationi

    Entry nameiI3YUI4_AEQSU
    AccessioniPrimary (citable) accession number: I3YUI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3