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I3YUI4

- I3YUI4_AEQSU

UniProt

I3YUI4 - I3YUI4_AEQSU

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
Aeqsu_1156
Organism
Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASUB746697:GL7Y-1156-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Aeqsu_1156Imported
OrganismiAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)Imported
Taxonomic identifieri746697 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeAequorivita
ProteomesiUP000006049: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3YUI4-1 [UniParc]FASTAAdd to Basket

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MKDFAQLIKK LDSTNKTNEK VAALTAYFQN ANDDDKLWTI AILSHRRPKR    50
PVNTTLLRLW ATEISGIPLW LFEESYHIVG DLAETIALIL PTSEEHSEKS 100
LSTFVSEIIA LRTLPEEEKK KYLHYNWLAL NYFERFVFNK ILTGSFRIGV 150
SQKLMTRALS KATAIDEDIL AYKLMGDWTP EKTTFQKLIL EENPEDYLSK 200
PYPFYLAYAV EADFQKDLGA ISDWSFEHKW DGIRSQVIIR NDEVFVWSRG 250
EELVTDKYPE FQRFLSAIPN GTVIDGEILP FGAGEIGNFN ALQTRIGRKN 300
ISKALLKKTP VILNAYDLLE WQGEDIRQKP FSERRKILDE LIQKINSEEV 350
GIYLSETMNF ETWEEAAEER KLSREKRSEG LMLKRKDSPY LVGRKKGDWW 400
KWKIDPFTID AVLTYAMRGH GRRANLYTDY TFGLWNDGEL VTFAKAYSGL 450
TDAEFRQVDA WIKRNTLERF GPVRSVTPHH VFEIAFEGIA ESSRHKSGIA 500
TRFPRILRWR KDKPIAEANT LDDLKALIPK 530
Length:530
Mass (Da):61,454
Last modified:September 5, 2012 - v1
Checksum:i3D678C1D4DD2C3FF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003280 Genomic DNA. Translation: AFL80652.1.
RefSeqiWP_014781910.1. NC_018013.1.
YP_006417667.1. NC_018013.1.

Genome annotation databases

EnsemblBacteriaiAFL80652; AFL80652; Aeqsu_1156.
GeneIDi13044541.
KEGGiasl:Aeqsu_1156.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003280 Genomic DNA. Translation: AFL80652.1 .
RefSeqi WP_014781910.1. NC_018013.1.
YP_006417667.1. NC_018013.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFL80652 ; AFL80652 ; Aeqsu_1156 .
GeneIDi 13044541.
KEGGi asl:Aeqsu_1156.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci ASUB746697:GL7Y-1156-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14238 / LMG 21431 / ACAM 643 / 9-3.

Entry informationi

Entry nameiI3YUI4_AEQSU
AccessioniPrimary (citable) accession number: I3YUI4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: September 3, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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