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I3YUI4

- I3YUI4_AEQSU

UniProt

I3YUI4 - I3YUI4_AEQSU

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Aeqsu_1156

Organism
Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASUB746697:GL7Y-1156-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Aeqsu_1156Imported
OrganismiAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)Imported
Taxonomic identifieri746697 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeAequorivita
ProteomesiUP000006049: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3YUI4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKDFAQLIKK LDSTNKTNEK VAALTAYFQN ANDDDKLWTI AILSHRRPKR
60 70 80 90 100
PVNTTLLRLW ATEISGIPLW LFEESYHIVG DLAETIALIL PTSEEHSEKS
110 120 130 140 150
LSTFVSEIIA LRTLPEEEKK KYLHYNWLAL NYFERFVFNK ILTGSFRIGV
160 170 180 190 200
SQKLMTRALS KATAIDEDIL AYKLMGDWTP EKTTFQKLIL EENPEDYLSK
210 220 230 240 250
PYPFYLAYAV EADFQKDLGA ISDWSFEHKW DGIRSQVIIR NDEVFVWSRG
260 270 280 290 300
EELVTDKYPE FQRFLSAIPN GTVIDGEILP FGAGEIGNFN ALQTRIGRKN
310 320 330 340 350
ISKALLKKTP VILNAYDLLE WQGEDIRQKP FSERRKILDE LIQKINSEEV
360 370 380 390 400
GIYLSETMNF ETWEEAAEER KLSREKRSEG LMLKRKDSPY LVGRKKGDWW
410 420 430 440 450
KWKIDPFTID AVLTYAMRGH GRRANLYTDY TFGLWNDGEL VTFAKAYSGL
460 470 480 490 500
TDAEFRQVDA WIKRNTLERF GPVRSVTPHH VFEIAFEGIA ESSRHKSGIA
510 520 530
TRFPRILRWR KDKPIAEANT LDDLKALIPK
Length:530
Mass (Da):61,454
Last modified:September 5, 2012 - v1
Checksum:i3D678C1D4DD2C3FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003280 Genomic DNA. Translation: AFL80652.1.
RefSeqiYP_006417667.1. NC_018013.1.

Genome annotation databases

EnsemblBacteriaiAFL80652; AFL80652; Aeqsu_1156.
GeneIDi13044541.
KEGGiasl:Aeqsu_1156.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003280 Genomic DNA. Translation: AFL80652.1 .
RefSeqi YP_006417667.1. NC_018013.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFL80652 ; AFL80652 ; Aeqsu_1156 .
GeneIDi 13044541.
KEGGi asl:Aeqsu_1156.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci ASUB746697:GL7Y-1156-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14238 / LMG 21431 / ACAM 643 / 9-3Imported.

Entry informationi

Entry nameiI3YUI4_AEQSU
AccessioniPrimary (citable) accession number: I3YUI4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 29, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3