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I3YMX8 (I3YMX8_ALIFI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
I3YMX8 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 6A92ED8249B16632

FASTA39543,484
        10         20         30         40         50         60 
MAKEKFDRSK PHVNIGTIGH VDHGKTTLTA AITTVLAKKG LSELRSFDSI DNAPEEKERG 

        70         80         90        100        110        120 
ITINTSHVEY QTANRHYAHV DCPGHADYVK NMVTGAAQMD GAILVVAATD GPMPQTNEHV 

       130        140        150        160        170        180 
LLARQVNVPR IVVFLNKCDM VDDPEMLDLV EMEVRDLLSK YEYDGDNAPV IRGSALGGLN 

       190        200        210        220        230        240 
GEPAWEDKIM ELMNAVDEYI PIPQRENEKP FLMPVEDVFS ITGRGTVVTG RIETGIIHVG 

       250        260        270        280        290        300 
DPVEIVGLEE KTLTSTCTGV EMFRKLLDEG EAGDNVGLLL RGIDKKEVKR GMVVAKPGSI 

       310        320        330        340        350        360 
TPHTEFEAEV YILKKEEGGR HTPFHNNYRP QFYLRTMDVT GEVHLPAGVD MVMPGDHVTI 

       370        380        390 
TVKLIYPVAI NEGLRFAIRE GGRTVGAGQI LKIVK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003274 Genomic DNA. Translation: AFL78346.1.
RefSeqYP_006411031.1. NC_018011.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL78346; AFL78346; Alfi_2042.
GeneID13053298.
KEGGafd:Alfi_2042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycAFIN679935:GL7P-2042-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3YMX8_ALIFI
AccessionPrimary (citable) accession number: I3YMX8
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)