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I3YIB0

- I3YIB0_ALIFI

UniProt

I3YIB0 - I3YIB0_ALIFI

Protein
Submitted name:

Alanine racemase

Gene

Alfi_0326

Organism
Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.SAAS annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: InterPro
    2. ATP binding Source: InterPro
    3. ligase activity Source: InterPro

    GO - Biological processi

    1. alanine metabolic process Source: InterPro
    2. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    IsomeraseSAAS annotation

    Keywords - Ligandi

    Pyridoxal phosphateSAAS annotation

    Enzyme and pathway databases

    BioCyciAFIN679935:GL7P-326-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alanine racemaseImported
    Gene namesi
    Ordered Locus Names:Alfi_0326Imported
    OrganismiAlistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999)Imported
    Taxonomic identifieri679935 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesRikenellaceaeAlistipes
    ProteomesiUP000006052: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliI3YIB0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01775.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    3.40.1190.10. 1 hit.
    3.40.1390.10. 1 hit.
    3.90.190.20. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR004101. Mur_ligase_C.
    IPR013221. Mur_ligase_cen.
    IPR000713. Mur_ligase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    PF01225. Mur_ligase. 1 hit.
    PF08245. Mur_ligase_M. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    SSF53244. SSF53244. 1 hit.
    SSF53623. SSF53623. 1 hit.
    SSF63418. SSF63418. 1 hit.
    TIGRFAMsiTIGR00492. alr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I3YIB0-1 [UniParc]FASTAAdd to Basket

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    MNYRLSRIAA ICGGKFSGCD SEVRSVVTDS RSLSCELGCR PMFVAMRGAN    50
    HDSHDFIADM QSRGVRAFLV ERGVEASSCT GECGFVQVDN AIEALQRLAA 100
    YHRAQFRGTV VGITGSNGKT VIKEWIAEEL PEGMKYYRSP KSYNSQLGVP 150
    LSVLMLEGDE ELAIFEAGIS KPGEMERLER IIRPDAVIFT SIGDAHQENF 200
    INLEQKCDEK MILARSASKI IYHSYYEPLG RMVAAHFADR RPVDAASYPE 250
    VPESVIGNAA SRRNAQIVEA FCDAMRYPAP SFAGAPSVAM RLEVKEGIND 300
    SILINDAYNL DLNSLALALD YLHSVALNRR RTLVLSDISQ SGLSDDELYS 350
    RVAGMVARAG IDFLIGIGPR LKRYAALFAC DKEFFTATDE CVARINRDAV 400
    AGRAILLKGA RDFRFEKLVH LLSRKSHTTV LEVDLDAMIH NLNYFRSKLS 450
    FGTRLVAMVK AGSYGAGDFE VAQMLQHQGV DYLAVAFADE GVLLRERGIS 500
    MPIVVLNADA DSFDVMIANR LEPEIYSFHS LGAFADAVTH AGESRYPIHV 550
    KLDTGMHRLG FVEQEIAQLC ATLAATPQVK AASVFSHLNC ADMPEEDAYT 600
    RAQIALYDRM SAQLAASLPY PVIRHTANSA AIERFPEAQF DMCRLGLGLY 650
    GFGFRHNDAL RPVSTLKTRI VQIKRLPAGD AVGYGRAGKL TRPTTTATIP 700
    IGYADGLDRH LGCGRWSVLV AGQPAPIIGR VCMDSCMIDI TDIPGVKEGD 750
    EVSVFSPVPG NDLETMARVL DTISYEIMTS VSGRVKRIYL KE 792
    Length:792
    Mass (Da):86,894
    Last modified:September 5, 2012 - v1
    Checksum:iC8A9011A0CEFD5F7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003274 Genomic DNA. Translation: AFL76728.1.
    RefSeqiWP_014774519.1. NC_018011.1.
    YP_006409413.1. NC_018011.1.

    Genome annotation databases

    EnsemblBacteriaiAFL76728; AFL76728; Alfi_0326.
    GeneIDi13051582.
    KEGGiafd:Alfi_0326.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003274 Genomic DNA. Translation: AFL76728.1 .
    RefSeqi WP_014774519.1. NC_018011.1.
    YP_006409413.1. NC_018011.1.

    3D structure databases

    ProteinModelPortali I3YIB0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFL76728 ; AFL76728 ; Alfi_0326 .
    GeneIDi 13051582.
    KEGGi afd:Alfi_0326.

    Phylogenomic databases

    KOi K01775.

    Enzyme and pathway databases

    BioCyci AFIN679935:GL7P-326-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    3.40.1190.10. 1 hit.
    3.40.1390.10. 1 hit.
    3.90.190.20. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR004101. Mur_ligase_C.
    IPR013221. Mur_ligase_cen.
    IPR000713. Mur_ligase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    PF01225. Mur_ligase. 1 hit.
    PF08245. Mur_ligase_M. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    SSF53244. SSF53244. 1 hit.
    SSF53623. SSF53623. 1 hit.
    SSF63418. SSF63418. 1 hit.
    TIGRFAMsi TIGR00492. alr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999Imported.

    Entry informationi

    Entry nameiI3YIB0_ALIFI
    AccessioniPrimary (citable) accession number: I3YIB0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3