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Protein
Submitted name:

Alanine racemase

Gene

Alfi_0326

Organism
Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateSAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateSAAS annotation

Enzyme and pathway databases

BioCyciAFIN679935:GL7P-326-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alanine racemaseImported
Gene namesi
Ordered Locus Names:Alfi_0326Imported
OrganismiAlistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999)Imported
Taxonomic identifieri679935 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesRikenellaceaeAlistipes
ProteomesiUP000006052 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI3YIB0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01775.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
3.40.1190.10. 1 hit.
3.40.1390.10. 1 hit.
3.90.190.20. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR004101. Mur_ligase_C.
IPR013221. Mur_ligase_cen.
IPR000713. Mur_ligase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
PF01225. Mur_ligase. 1 hit.
PF08245. Mur_ligase_M. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
SSF53244. SSF53244. 1 hit.
SSF53623. SSF53623. 1 hit.
SSF63418. SSF63418. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.

Sequencei

Sequence statusi: Complete.

I3YIB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNYRLSRIAA ICGGKFSGCD SEVRSVVTDS RSLSCELGCR PMFVAMRGAN
60 70 80 90 100
HDSHDFIADM QSRGVRAFLV ERGVEASSCT GECGFVQVDN AIEALQRLAA
110 120 130 140 150
YHRAQFRGTV VGITGSNGKT VIKEWIAEEL PEGMKYYRSP KSYNSQLGVP
160 170 180 190 200
LSVLMLEGDE ELAIFEAGIS KPGEMERLER IIRPDAVIFT SIGDAHQENF
210 220 230 240 250
INLEQKCDEK MILARSASKI IYHSYYEPLG RMVAAHFADR RPVDAASYPE
260 270 280 290 300
VPESVIGNAA SRRNAQIVEA FCDAMRYPAP SFAGAPSVAM RLEVKEGIND
310 320 330 340 350
SILINDAYNL DLNSLALALD YLHSVALNRR RTLVLSDISQ SGLSDDELYS
360 370 380 390 400
RVAGMVARAG IDFLIGIGPR LKRYAALFAC DKEFFTATDE CVARINRDAV
410 420 430 440 450
AGRAILLKGA RDFRFEKLVH LLSRKSHTTV LEVDLDAMIH NLNYFRSKLS
460 470 480 490 500
FGTRLVAMVK AGSYGAGDFE VAQMLQHQGV DYLAVAFADE GVLLRERGIS
510 520 530 540 550
MPIVVLNADA DSFDVMIANR LEPEIYSFHS LGAFADAVTH AGESRYPIHV
560 570 580 590 600
KLDTGMHRLG FVEQEIAQLC ATLAATPQVK AASVFSHLNC ADMPEEDAYT
610 620 630 640 650
RAQIALYDRM SAQLAASLPY PVIRHTANSA AIERFPEAQF DMCRLGLGLY
660 670 680 690 700
GFGFRHNDAL RPVSTLKTRI VQIKRLPAGD AVGYGRAGKL TRPTTTATIP
710 720 730 740 750
IGYADGLDRH LGCGRWSVLV AGQPAPIIGR VCMDSCMIDI TDIPGVKEGD
760 770 780 790
EVSVFSPVPG NDLETMARVL DTISYEIMTS VSGRVKRIYL KE
Length:792
Mass (Da):86,894
Last modified:September 5, 2012 - v1
Checksum:iC8A9011A0CEFD5F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003274 Genomic DNA. Translation: AFL76728.1.
RefSeqiWP_014774519.1. NC_018011.1.

Genome annotation databases

EnsemblBacteriaiAFL76728; AFL76728; Alfi_0326.
KEGGiafd:Alfi_0326.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003274 Genomic DNA. Translation: AFL76728.1.
RefSeqiWP_014774519.1. NC_018011.1.

3D structure databases

ProteinModelPortaliI3YIB0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL76728; AFL76728; Alfi_0326.
KEGGiafd:Alfi_0326.

Phylogenomic databases

KOiK01775.

Enzyme and pathway databases

BioCyciAFIN679935:GL7P-326-MONOMER.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
3.40.1190.10. 1 hit.
3.40.1390.10. 1 hit.
3.90.190.20. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR004101. Mur_ligase_C.
IPR013221. Mur_ligase_cen.
IPR000713. Mur_ligase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
PF01225. Mur_ligase. 1 hit.
PF08245. Mur_ligase_M. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
SSF53244. SSF53244. 1 hit.
SSF53623. SSF53623. 1 hit.
SSF63418. SSF63418. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999Imported.

Entry informationi

Entry nameiI3YIB0_ALIFI
AccessioniPrimary (citable) accession number: I3YIB0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: July 22, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.