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I3YGD3

- I3YGD3_THIV6

UniProt

I3YGD3 - I3YGD3_THIV6

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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

Thivi_4238

Organism
Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTVIO765911:GLMH-4221-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
Ordered Locus Names:Thivi_4238Imported
OrganismiThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens)Imported
Taxonomic identifieri765911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThiocystis
ProteomesiUP000006062: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI3YGD3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3YGD3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MALDQSARYS DLSLTEADLI AGGKHILVAY KMKPKGGIGY LEAAAHFAAE
60 70 80 90 100
SSTGTNVEVS TTDDFTKGVD ALVYYIDEAN EDMRIAYPLD LFDRNMTDGR
110 120 130 140 150
MMIVSFLTLV IGNNQGMGDI EYGQMIDFHM PDRAIQLFDG PSKDISDLWR
160 170 180 190 200
ILGRPIKDGG YIAGTIIKPK LGLRPEPFAH AAYQFWLGGD FIKNDEPQGN
210 220 230 240 250
QTFCPSKKVI PLVYDSLKRA QDETGQAKLF SANITADDHY EMCARADFIL
260 270 280 290 300
ETFGPDADKV AFLVDGFVGG PGMITTARRQ YPNQYLHYHR AGHGMITSPS
310 320 330 340 350
ANRGYTAFVL AKISRLQGAS GIHVGTMGYG KMEGGADDKI IAYMIERDEC
360 370 380 390 400
QGPVYYQKWH GMKPTTPIIS GGMNALRLPG FFANLGHGNV INTAGGGSYG
410 420 430 440 450
HIDSPAAGAI SLRQSYECWK AGADPIEFAK EHKEFARAFA SFPLDADKLF
460
PGWRDKLGAA AEHK
Length:464
Mass (Da):50,760
Last modified:September 5, 2012 - v1
Checksum:i29C196158DBF639E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003154 Genomic DNA. Translation: AFL76051.1.
RefSeqiWP_014780433.1. NC_018012.1.
YP_006416176.1. NC_018012.1.

Genome annotation databases

EnsemblBacteriaiAFL76051; AFL76051; Thivi_4238.
GeneIDi13049814.
KEGGitvi:Thivi_4238.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003154 Genomic DNA. Translation: AFL76051.1 .
RefSeqi WP_014780433.1. NC_018012.1.
YP_006416176.1. NC_018012.1.

3D structure databases

ProteinModelPortali I3YGD3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFL76051 ; AFL76051 ; Thivi_4238 .
GeneIDi 13049814.
KEGGi tvi:Thivi_4238.

Phylogenomic databases

KOi K01601.

Enzyme and pathway databases

BioCyci TVIO765911:GLMH-4221-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPi MF_01339. RuBisCO_L_type2.
InterProi IPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17096 / DSM 198 / 6111Imported.

Entry informationi

Entry nameiI3YGD3_THIV6
AccessioniPrimary (citable) accession number: I3YGD3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 29, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3