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I3YGD3 (I3YGD3_THIV6) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Thivi_4238 EMBL AFL76051.1
OrganismThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens) [Complete proteome] [HAMAP] EMBL AFL76051.1
Taxonomic identifier765911 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThiocystis

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3YGD3 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 29C196158DBF639E

FASTA46450,760
        10         20         30         40         50         60 
MALDQSARYS DLSLTEADLI AGGKHILVAY KMKPKGGIGY LEAAAHFAAE SSTGTNVEVS 

        70         80         90        100        110        120 
TTDDFTKGVD ALVYYIDEAN EDMRIAYPLD LFDRNMTDGR MMIVSFLTLV IGNNQGMGDI 

       130        140        150        160        170        180 
EYGQMIDFHM PDRAIQLFDG PSKDISDLWR ILGRPIKDGG YIAGTIIKPK LGLRPEPFAH 

       190        200        210        220        230        240 
AAYQFWLGGD FIKNDEPQGN QTFCPSKKVI PLVYDSLKRA QDETGQAKLF SANITADDHY 

       250        260        270        280        290        300 
EMCARADFIL ETFGPDADKV AFLVDGFVGG PGMITTARRQ YPNQYLHYHR AGHGMITSPS 

       310        320        330        340        350        360 
ANRGYTAFVL AKISRLQGAS GIHVGTMGYG KMEGGADDKI IAYMIERDEC QGPVYYQKWH 

       370        380        390        400        410        420 
GMKPTTPIIS GGMNALRLPG FFANLGHGNV INTAGGGSYG HIDSPAAGAI SLRQSYECWK 

       430        440        450        460 
AGADPIEFAK EHKEFARAFA SFPLDADKLF PGWRDKLGAA AEHK 

« Hide

References

[1]"Complete sequence of Thiocystis violascens DSM 198."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K. expand/collapse author list , Liu Z., Frigaard N.-U., Bryant D., Woyke T.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17096 / DSM 198 / 6111.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003154 Genomic DNA. Translation: AFL76051.1.
RefSeqYP_006416176.1. NC_018012.1.

3D structure databases

ProteinModelPortalI3YGD3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL76051; AFL76051; Thivi_4238.
GeneID13049814.
KEGGtvi:Thivi_4238.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycTVIO765911:GLMH-4221-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01339. RuBisCO_L_type2.
InterProIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3YGD3_THIV6
AccessionPrimary (citable) accession number: I3YGD3
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 11, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)