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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

Thivi_3125

Organism
Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTVIO765911:GLMH-3111-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
Ordered Locus Names:Thivi_3125Imported
OrganismiThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens)Imported
Taxonomic identifieri765911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThiocystis
ProteomesiUP000006062: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI3YDD4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.
OMAiIEQSVEC.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

I3YDD4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQNRTLSLS GERFTAVYHI VCKPAEAEAR ARDICVEQTI EFPEALVTDA
60 70 80 90 100
SIRDQIVGQV LSLQAVGEAR FEARIGYPVE AAGRELTQLI NVLFGNISIK
110 120 130 140 150
PGVRLVGFEL PESLARQYRG PRFGQAGLRA LVDVHDRPLL CTAIKPMGLS
160 170 180 190 200
PVALADLAYR LALGGIHLIK DDHGLSDQTF CRYEERVRRC AEAVERANRE
210 220 230 240 250
TGQRCLYLPN VTAPAGEIAS RARLAKDAGA GGLLFCPGLA GFDAMRALAD
260 270 280 290 300
DDALALPILS HPAFQGTFCV HPDAGLSHGV LFGQLNRLAG ADATIFPSWG
310 320 330 340 350
GRFSFTQAEC RDLVAGATRP MGELRTIFPV PGGGMRLDRV AELSDFYGRD
360 370
CILLIGGDLH AHGPDLIESC RRFVAQAG
Length:378
Mass (Da):40,790
Last modified:September 5, 2012 - v1
Checksum:iDBBE8A1C904B72AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003154 Genomic DNA. Translation: AFL75002.1.
RefSeqiYP_006415127.1. NC_018012.1.

Genome annotation databases

EnsemblBacteriaiAFL75002; AFL75002; Thivi_3125.
GeneIDi13050889.
KEGGitvi:Thivi_3125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003154 Genomic DNA. Translation: AFL75002.1.
RefSeqiYP_006415127.1. NC_018012.1.

3D structure databases

ProteinModelPortaliI3YDD4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL75002; AFL75002; Thivi_3125.
GeneIDi13050889.
KEGGitvi:Thivi_3125.

Phylogenomic databases

KOiK01601.
OMAiIEQSVEC.

Enzyme and pathway databases

BioCyciTVIO765911:GLMH-3111-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17096 / DSM 198 / 6111Imported.

Entry informationi

Entry nameiI3YDD4_THIV6
AccessioniPrimary (citable) accession number: I3YDD4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: March 4, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.