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I3YAD2 (I3YAD2_THIV6) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Thivi_1992 EMBL AFL73950.1
OrganismThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens) [Complete proteome] [HAMAP] EMBL AFL73950.1
Taxonomic identifier765911 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThiocystis

Protein attributes

Sequence length450 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3YAD2 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 5D02E10EBD76D7C4

FASTA45048,445
        10         20         30         40         50         60 
MKDSDWSGFF ADAAALNPDA YIILDYYLEC IGDPRIAAAH FCSEQSTAQW RRVGSSEDLR 

        70         80         90        100        110        120 
PRFAARVVDL TVLESGRPGF SYGIAHSQGG DVQACRVTIA HPHGNFGPRL PNLLSAVCGE 

       130        140        150        160        170        180 
GTFFSPGAPV VKLLDIHLPD AYLAEFEGPR FGVEGLRDLL QVYDRPLFFG VIKPNIGLPP 

       190        200        210        220        230        240 
EAFSDLGYQS WLGGLDIAKD DEMLGDTEWC PLARRSELLG AARQRAEQAT GCPKFYLANI 

       250        260        270        280        290        300 
TDEVERLIDL HDIAVANGAN ALLINAMPVG LSAVRMLRRH ARVPLIAHFP FIAPFSRLPN 

       310        320        330        340        350        360 
FGVHSRVFAK LQRLAGFDAI IMPGFGERMH SSDDEVRENV AACLAPMGAI KPSLPVPGGS 

       370        380        390        400        410        420 
DWAGTLKGVY DKVGTIDFGF VPGRGVFGHP MGPRGGAASI RQAWDAIVAG VSLGEQAAKH 

       430        440        450 
VELRAAIETF GRNDIAPPDE AAGKCTGDES 

« Hide

References

[1]"Complete sequence of Thiocystis violascens DSM 198."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K. expand/collapse author list , Liu Z., Frigaard N.-U., Bryant D., Woyke T.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17096 / DSM 198 / 6111.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003154 Genomic DNA. Translation: AFL73950.1.
RefSeqYP_006414075.1. NC_018012.1.

3D structure databases

ProteinModelPortalI3YAD2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL73950; AFL73950; Thivi_1992.
GeneID13048129.
KEGGtvi:Thivi_1992.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycTVIO765911:GLMH-1983-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI3YAD2_THIV6
AccessionPrimary (citable) accession number: I3YAD2
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 22, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)