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Protein
Submitted name:

Succinate-semialdehyde dehydrogenase [NADP+] GabD

Gene

gabD7

Organism
Sinorhizobium fredii USDA 257
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate-semialdehyde dehydrogenase [NADP+] GabDImported (EC:1.2.1.79Imported)
Gene namesi
Name:gabD7Imported
ORF Names:USDA257_c58040Imported
OrganismiSinorhizobium fredii USDA 257Imported
Taxonomic identifieri1185652 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000006180 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

KOiK00128.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3XEK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIAATKVDV AKEAAALLDK MGVARELYTG GDMPSYSPVT GEQIASLKTV
60 70 80 90 100
SAAEAAGKIE QADEAFRAWR LVPAPKRGEL VRLLGEELRA FKADLGRLVS
110 120 130 140 150
LEAGKIPSEG LGEVQEMIDI CDFAVGLSRQ LYGLTIATER PGHRMMETWH
160 170 180 190 200
PLGVVGIISA FNFPVAVWSW NAALALVCGN AVVWKPSEKT PLTALACEAI
210 220 230 240 250
LERALARFGD APAGLSQVLI GDRAIGEVLV DHPKVPLVSA TGSTRMGRDV
260 270 280 290 300
GPRLAKRFAR AILELGGNNA GIVCPSADLD MALRAIAFGA MGTAGQRCTT
310 320 330 340 350
LRRLFVHESV YDQLVPRLKK AYQSVSVGNP LESTALVGPL VDKAAFDSMQ
360 370 380 390 400
KAIAEAKSEG GAVTGGERVE LGYENGYYVK PALVEMPKQV GPVLEETFAP
410 420 430 440 450
ILYVMKYSDF DAVVADHNAV AAGLSSSIFT RDMQESERFL AADGSDCGIA
460 470 480 490 500
NVNIGTSGAE IGGAFGGEKE TGGGRESGSD AWRAYMRRAT NTINYSKALP
510
LAQGVSFDIE
Length:510
Mass (Da):54,067
Last modified:September 5, 2012 - v1
Checksum:iC4FC06DEEB9B50E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL54315.1.
RefSeqiWP_014766420.1. NC_018000.1.
YP_006401072.1. NC_018000.1.

Genome annotation databases

EnsemblBacteriaiAFL54315; AFL54315; USDA257_c58040.
KEGGisfd:USDA257_c58040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL54315.1.
RefSeqiWP_014766420.1. NC_018000.1.
YP_006401072.1. NC_018000.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL54315; AFL54315; USDA257_c58040.
KEGGisfd:USDA257_c58040.

Phylogenomic databases

KOiK00128.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
    Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
    J. Bacteriol. 194:4483-4483(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 257Imported.

Entry informationi

Entry nameiI3XEK9_RHIFR
AccessioniPrimary (citable) accession number: I3XEK9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 1, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.