I3XDY6 (I3XDY6_RHIFR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 componentSucA EMBL AFL54092.1
EC=1.2.4.2 EMBL AFL54092.1

Gene names

Name:	sucA EMBL AFL54092.1
ORF Names:	USDA257_c55770 EMBL AFL54092.1

Organism

Sinorhizobium fredii USDA 257 EMBL AFL54092.1

Taxonomic identifier

1185652 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	998 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL AFL54092.1
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I3XDY6 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: C195F95E357B9004	FASTA	998	112,368
	10 20 30 40 50 60 MTRQEANEQF QLTSFLDGAN AAYIEQLYAR YEADPSSVSA EWQSFFKALA DRPEDVVKAA 70 80 90 100 110 120 KGASWKKKNW PIAANGELVS ALDGDWGTVE KVVEKKVKAK AEEAAAATGV PVSEAEVHQS 130 140 150 160 170 180 TRDSVRAIMM IRAYRMRGHL HAKLDPLGLA DPVEDYDELA PKTYGFEEKD YDRKIFIDNV 190 200 210 220 230 240 LGLEYATVRE MVEILERTYC STMGVEFMHM SNPEEKAWIQ ERIEGPDKGV EFTPEGKRAI 250 260 270 280 290 300 LQKLIEAEGF EQFIDVKYKG TKRFGLDGGE SLIPALEQLI KRGGQLGLKE IVLGMAHRGR 310 320 330 340 350 360 LNVLSQVMAK PHRAIFHEFK GGSYAPDDVE GSGDVKYHLG ASSDREFDGN KVHLSLTANP 370 380 390 400 410 420 SHLEIVNPVV MGKARAKQDQ MATVFEGDII PLRERVKVMP LLLHGDAAFA GQGVIAEILG 430 440 450 460 470 480 LSGLRGHRVA GTVHFIINNQ IGFTTNPAFS RSSPYPSDVA KMIEAPIFHV NGDDPEAVVY 490 500 510 520 530 540 AAKVATEFRM KFHKPVVVDM FCYRRFGHNE GDEPAFTQPK MYKAIRAHKT VVQVYSERLV 550 560 570 580 590 600 AEGLMNDGEV EKMKADWRAR LEQEFEAGQS YKPNKADWLD GAWSGLRTAD NQDEQRRGRT 610 620 630 640 650 660 SVPMKQLKEV GRKISEIPAG FSAHRTIQRF MENRANMVQT GEGIDWAMAE ALAFGTLVTE 670 680 690 700 710 720 GTKIRLSGQD CERGTFSQRH SVLYDQETEE RYIPLANLSP TQARYEVINS MLSEEAVLGF 730 740 750 760 770 780 EYGYSLARPN ALTLWEAQFG DFANGAQVVF DQFISSGERK WLRMSGLVCL LPHGYEGQGP 790 800 810 820 830 840 EHSSARLERF LQLCAEDNMQ VANVTTPANY FHILRRQVKR DFRKPLILMT PKSLLRHKRA 850 860 870 880 890 900 VSSLSEMAGE SSFHRLLWDD AEVIKDGPIK LQKDSKIRRV VMCSGKVYYD LLEEREKRGI 910 920 930 940 950 960 DDIYLLRVEQ LYPFPAKALI NELSRFRHAE MVWCQEEPKN MGAWSFIDPY LEWVLAHIDA 970 980 990 KYQRVRYTGR PAAASPATGL MSKHMAQLNA FLEDALGG

References

[1]

"Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257." Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R. J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: USDA 257 EMBL AFL54092.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003563 Genomic DNA. Translation: AFL54092.1.
RefSeq	YP_006400849.1. NC_018000.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFL54092; AFL54092; USDA257_c55770.
GeneID	13068604.
KEGG	sfd:USDA257_c55770.
Phylogenomic databases
KO	K00164.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

I3XDY6_RHIFR

Accession

Primary (citable) accession number: I3XDY6

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)