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I3XDY6 (I3XDY6_RHIFR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.4.2 EMBL AFL54092.1
Gene names
Name:sucA EMBL AFL54092.1
ORF Names:USDA257_c55770 EMBL AFL54092.1
OrganismSinorhizobium fredii USDA 257 [Complete proteome] EMBL AFL54092.1
Taxonomic identifier1185652 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length998 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
I3XDY6 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: C195F95E357B9004

FASTA998112,368
        10         20         30         40         50         60 
MTRQEANEQF QLTSFLDGAN AAYIEQLYAR YEADPSSVSA EWQSFFKALA DRPEDVVKAA 

        70         80         90        100        110        120 
KGASWKKKNW PIAANGELVS ALDGDWGTVE KVVEKKVKAK AEEAAAATGV PVSEAEVHQS 

       130        140        150        160        170        180 
TRDSVRAIMM IRAYRMRGHL HAKLDPLGLA DPVEDYDELA PKTYGFEEKD YDRKIFIDNV 

       190        200        210        220        230        240 
LGLEYATVRE MVEILERTYC STMGVEFMHM SNPEEKAWIQ ERIEGPDKGV EFTPEGKRAI 

       250        260        270        280        290        300 
LQKLIEAEGF EQFIDVKYKG TKRFGLDGGE SLIPALEQLI KRGGQLGLKE IVLGMAHRGR 

       310        320        330        340        350        360 
LNVLSQVMAK PHRAIFHEFK GGSYAPDDVE GSGDVKYHLG ASSDREFDGN KVHLSLTANP 

       370        380        390        400        410        420 
SHLEIVNPVV MGKARAKQDQ MATVFEGDII PLRERVKVMP LLLHGDAAFA GQGVIAEILG 

       430        440        450        460        470        480 
LSGLRGHRVA GTVHFIINNQ IGFTTNPAFS RSSPYPSDVA KMIEAPIFHV NGDDPEAVVY 

       490        500        510        520        530        540 
AAKVATEFRM KFHKPVVVDM FCYRRFGHNE GDEPAFTQPK MYKAIRAHKT VVQVYSERLV 

       550        560        570        580        590        600 
AEGLMNDGEV EKMKADWRAR LEQEFEAGQS YKPNKADWLD GAWSGLRTAD NQDEQRRGRT 

       610        620        630        640        650        660 
SVPMKQLKEV GRKISEIPAG FSAHRTIQRF MENRANMVQT GEGIDWAMAE ALAFGTLVTE 

       670        680        690        700        710        720 
GTKIRLSGQD CERGTFSQRH SVLYDQETEE RYIPLANLSP TQARYEVINS MLSEEAVLGF 

       730        740        750        760        770        780 
EYGYSLARPN ALTLWEAQFG DFANGAQVVF DQFISSGERK WLRMSGLVCL LPHGYEGQGP 

       790        800        810        820        830        840 
EHSSARLERF LQLCAEDNMQ VANVTTPANY FHILRRQVKR DFRKPLILMT PKSLLRHKRA 

       850        860        870        880        890        900 
VSSLSEMAGE SSFHRLLWDD AEVIKDGPIK LQKDSKIRRV VMCSGKVYYD LLEEREKRGI 

       910        920        930        940        950        960 
DDIYLLRVEQ LYPFPAKALI NELSRFRHAE MVWCQEEPKN MGAWSFIDPY LEWVLAHIDA 

       970        980        990 
KYQRVRYTGR PAAASPATGL MSKHMAQLNA FLEDALGG 

« Hide

References

[1]"Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 257 EMBL AFL54092.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003563 Genomic DNA. Translation: AFL54092.1.
RefSeqYP_006400849.1. NC_018000.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL54092; AFL54092; USDA257_c55770.
GeneID13068604.
KEGGsfd:USDA257_c55770.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00164.

Family and domain databases

Gene3D3.40.50.970. 2 hits.
InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 2 hits.
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI3XDY6_RHIFR
AccessionPrimary (citable) accession number: I3XDY6
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 11, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)