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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 componentSucA

Gene

sucA

Organism
Sinorhizobium fredii USDA 257
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentSucAImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
ORF Names:USDA257_c55770Imported
OrganismiSinorhizobium fredii USDA 257Imported
Taxonomic identifieri1185652 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000006180 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

I3XDY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRQEANEQF QLTSFLDGAN AAYIEQLYAR YEADPSSVSA EWQSFFKALA
60 70 80 90 100
DRPEDVVKAA KGASWKKKNW PIAANGELVS ALDGDWGTVE KVVEKKVKAK
110 120 130 140 150
AEEAAAATGV PVSEAEVHQS TRDSVRAIMM IRAYRMRGHL HAKLDPLGLA
160 170 180 190 200
DPVEDYDELA PKTYGFEEKD YDRKIFIDNV LGLEYATVRE MVEILERTYC
210 220 230 240 250
STMGVEFMHM SNPEEKAWIQ ERIEGPDKGV EFTPEGKRAI LQKLIEAEGF
260 270 280 290 300
EQFIDVKYKG TKRFGLDGGE SLIPALEQLI KRGGQLGLKE IVLGMAHRGR
310 320 330 340 350
LNVLSQVMAK PHRAIFHEFK GGSYAPDDVE GSGDVKYHLG ASSDREFDGN
360 370 380 390 400
KVHLSLTANP SHLEIVNPVV MGKARAKQDQ MATVFEGDII PLRERVKVMP
410 420 430 440 450
LLLHGDAAFA GQGVIAEILG LSGLRGHRVA GTVHFIINNQ IGFTTNPAFS
460 470 480 490 500
RSSPYPSDVA KMIEAPIFHV NGDDPEAVVY AAKVATEFRM KFHKPVVVDM
510 520 530 540 550
FCYRRFGHNE GDEPAFTQPK MYKAIRAHKT VVQVYSERLV AEGLMNDGEV
560 570 580 590 600
EKMKADWRAR LEQEFEAGQS YKPNKADWLD GAWSGLRTAD NQDEQRRGRT
610 620 630 640 650
SVPMKQLKEV GRKISEIPAG FSAHRTIQRF MENRANMVQT GEGIDWAMAE
660 670 680 690 700
ALAFGTLVTE GTKIRLSGQD CERGTFSQRH SVLYDQETEE RYIPLANLSP
710 720 730 740 750
TQARYEVINS MLSEEAVLGF EYGYSLARPN ALTLWEAQFG DFANGAQVVF
760 770 780 790 800
DQFISSGERK WLRMSGLVCL LPHGYEGQGP EHSSARLERF LQLCAEDNMQ
810 820 830 840 850
VANVTTPANY FHILRRQVKR DFRKPLILMT PKSLLRHKRA VSSLSEMAGE
860 870 880 890 900
SSFHRLLWDD AEVIKDGPIK LQKDSKIRRV VMCSGKVYYD LLEEREKRGI
910 920 930 940 950
DDIYLLRVEQ LYPFPAKALI NELSRFRHAE MVWCQEEPKN MGAWSFIDPY
960 970 980 990
LEWVLAHIDA KYQRVRYTGR PAAASPATGL MSKHMAQLNA FLEDALGG
Length:998
Mass (Da):112,368
Last modified:September 5, 2012 - v1
Checksum:iC195F95E357B9004
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL54092.1.
RefSeqiWP_014766203.1. NC_018000.1.

Genome annotation databases

EnsemblBacteriaiAFL54092; AFL54092; USDA257_c55770.
KEGGisfd:USDA257_c55770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL54092.1.
RefSeqiWP_014766203.1. NC_018000.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL54092; AFL54092; USDA257_c55770.
KEGGisfd:USDA257_c55770.

Phylogenomic databases

KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
    Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
    J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 257Imported.

Entry informationi

Entry nameiI3XDY6_RHIFR
AccessioniPrimary (citable) accession number: I3XDY6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: July 22, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.