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I3XBQ0 (I3XBQ0_RHIFR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.1.3 EMBL AFL53306.1
Gene names
Name:ycbD EMBL AFL53306.1
ORF Names:USDA257_c47700 EMBL AFL53306.1
OrganismSinorhizobium fredii USDA 257 [Complete proteome] EMBL AFL53306.1
Taxonomic identifier1185652 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU003344 EMBL AFL53306.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionaldehyde dehydrogenase (NAD) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I3XBQ0 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 4F481152986E7F87

FASTA47750,748
        10         20         30         40         50         60 
MTLHQNLIAG EWVGGDGIAN VNPSNTNDVV GEYARATVDD AKAAIAAAKA AFPAWSRSGI 

        70         80         90        100        110        120 
LERHAILRKT ADEILARKDE LGRLLSREEG KTLAEGIGET VRAGQIFDFF AGECLRLAGE 

       130        140        150        160        170        180 
VIPSVRPNIG VEISREPVGV VGIITPWNFP IAIPAWKIAP ALCYGNTVVF KPAELVPGCS 

       190        200        210        220        230        240 
WAIVDILNRA GLPKGVLNLV MGKGSVVGQA MLDSPDVQAI TFTGSTGTGK RVAMASVEHN 

       250        260        270        280        290        300 
RKFQLEMGGK NPFVVLDDAD VAVAVEAAVN SAFFSTGQRC TASSRIIVTE GIHDKFVAAM 

       310        320        330        340        350        360 
GERIKGLVVD DALKAGTHIG PVVDQSQLNQ DTDYIAIGKQ EGARLAFGGE LISRDTPGFY 

       370        380        390        400        410        420 
LQPALFTEAT NQMRISREEI FGPVAAVIRV KDYDEALSVA NDTPFGLSSG IATTSLKHAT 

       430        440        450        460        470 
HFKRNSEAGM VMVNLPTAGV DFHVPFGGRK GSSHGPREQG RYAAEFYTTV KTAYTLA 

« Hide

References

[1]"Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 257 EMBL AFL53306.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003563 Genomic DNA. Translation: AFL53306.1.
RefSeqYP_006400063.1. NC_018000.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL53306; AFL53306; USDA257_c47700.
GeneID13064920.
KEGGsfd:USDA257_c47700.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00128.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3XBQ0_RHIFR
AccessionPrimary (citable) accession number: I3XBQ0
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 11, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)