Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative aldehyde dehydrogenase YcbD

Gene

ycbD

Organism
Sinorhizobium fredii USDA 257
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. aldehyde dehydrogenase (NAD) activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative aldehyde dehydrogenase YcbDImported (EC:1.2.1.3Imported)
Gene namesi
Name:ycbDImported
ORF Names:USDA257_c47700Imported
OrganismiSinorhizobium fredii USDA 257Imported
Taxonomic identifieri1185652 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000006180: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

KOiK00128.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3XBQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLHQNLIAG EWVGGDGIAN VNPSNTNDVV GEYARATVDD AKAAIAAAKA
60 70 80 90 100
AFPAWSRSGI LERHAILRKT ADEILARKDE LGRLLSREEG KTLAEGIGET
110 120 130 140 150
VRAGQIFDFF AGECLRLAGE VIPSVRPNIG VEISREPVGV VGIITPWNFP
160 170 180 190 200
IAIPAWKIAP ALCYGNTVVF KPAELVPGCS WAIVDILNRA GLPKGVLNLV
210 220 230 240 250
MGKGSVVGQA MLDSPDVQAI TFTGSTGTGK RVAMASVEHN RKFQLEMGGK
260 270 280 290 300
NPFVVLDDAD VAVAVEAAVN SAFFSTGQRC TASSRIIVTE GIHDKFVAAM
310 320 330 340 350
GERIKGLVVD DALKAGTHIG PVVDQSQLNQ DTDYIAIGKQ EGARLAFGGE
360 370 380 390 400
LISRDTPGFY LQPALFTEAT NQMRISREEI FGPVAAVIRV KDYDEALSVA
410 420 430 440 450
NDTPFGLSSG IATTSLKHAT HFKRNSEAGM VMVNLPTAGV DFHVPFGGRK
460 470
GSSHGPREQG RYAAEFYTTV KTAYTLA
Length:477
Mass (Da):50,748
Last modified:September 5, 2012 - v1
Checksum:i4F481152986E7F87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL53306.1.
RefSeqiWP_014765429.1. NC_018000.1.
YP_006400063.1. NC_018000.1.

Genome annotation databases

EnsemblBacteriaiAFL53306; AFL53306; USDA257_c47700.
GeneIDi13064920.
KEGGisfd:USDA257_c47700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL53306.1.
RefSeqiWP_014765429.1. NC_018000.1.
YP_006400063.1. NC_018000.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL53306; AFL53306; USDA257_c47700.
GeneIDi13064920.
KEGGisfd:USDA257_c47700.

Phylogenomic databases

KOiK00128.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR029510. Ald_DH_CS_GLU.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
    Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
    J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 257Imported.

Entry informationi

Entry nameiI3XBQ0_RHIFR
AccessioniPrimary (citable) accession number: I3XBQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: March 4, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.