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I3X4T6 (I3X4T6_RHIFR) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:USDA257_c23120 EMBL AFL50892.1
OrganismSinorhizobium fredii USDA 257 [Complete proteome] EMBL AFL50892.1
Taxonomic identifier1185652 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3X4T6 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 22304193713CD005

FASTA41844,876
        10         20         30         40         50         60 
MIRITYRIET PGDVVALAAK IASDQSTGTF VPVPGETEEL KARVAARVVA IRNLEPTDRP 

        70         80         90        100        110        120 
SWPEEAGEAK RFNRADADIE FPLDAVGTDL AALMTIAIGG VYSVKGMTGV RVVDMKLPPE 

       130        140        150        160        170        180 
FCAAHPGPQF GVAGSRRLTG VEEGPIIGTI VKPALGLRPE ETGELVGELL SSGVDFIKDD 

       190        200        210        220        230        240 
EKLMSPVYSP LKERIAAIMP RILNHEQKTG KKVMYAFGIS HTDPDEMMRN HDHVVQAGGN 

       250        260        270        280        290        300 
AGVVNINSIG MGGLGFLRKR SGIVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLIGVDQF 

       310        320        330        340        350        360 
QINGIRVKYW EPDESFVKSF KAVSTPLLSE RDCPLPVVGS GQWGGQAPET YARTGGSTDL 

       370        380        390        400        410 
LYLCGGGIVS HPGGAGAGVR AVRHAWEAAV AGIPLADYAK DHPELAQSLV KFADGKGT 

« Hide

References

[1]"Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 257 EMBL AFL50892.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003563 Genomic DNA. Translation: AFL50892.1.
RefSeqYP_006397649.1. NC_018000.1.

3D structure databases

ProteinModelPortalI3X4T6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL50892; AFL50892; USDA257_c23120.
GeneID13067782.
KEGGsfd:USDA257_c23120.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3X4T6_RHIFR
AccessionPrimary (citable) accession number: I3X4T6
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 22, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)