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Protein
Submitted name:

Putative ribulose bisphosphate carboxylase-like protein

Gene

USDA257_c23120

Organism
Sinorhizobium fredii USDA 257
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribulose bisphosphate carboxylase-like proteinImported
Gene namesi
ORF Names:USDA257_c23120Imported
OrganismiSinorhizobium fredii USDA 257Imported
Taxonomic identifieri1185652 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000006180 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI3X4T6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3X4T6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRITYRIET PGDVVALAAK IASDQSTGTF VPVPGETEEL KARVAARVVA
60 70 80 90 100
IRNLEPTDRP SWPEEAGEAK RFNRADADIE FPLDAVGTDL AALMTIAIGG
110 120 130 140 150
VYSVKGMTGV RVVDMKLPPE FCAAHPGPQF GVAGSRRLTG VEEGPIIGTI
160 170 180 190 200
VKPALGLRPE ETGELVGELL SSGVDFIKDD EKLMSPVYSP LKERIAAIMP
210 220 230 240 250
RILNHEQKTG KKVMYAFGIS HTDPDEMMRN HDHVVQAGGN AGVVNINSIG
260 270 280 290 300
MGGLGFLRKR SGIVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLIGVDQF
310 320 330 340 350
QINGIRVKYW EPDESFVKSF KAVSTPLLSE RDCPLPVVGS GQWGGQAPET
360 370 380 390 400
YARTGGSTDL LYLCGGGIVS HPGGAGAGVR AVRHAWEAAV AGIPLADYAK
410
DHPELAQSLV KFADGKGT
Length:418
Mass (Da):44,876
Last modified:September 5, 2012 - v1
Checksum:i22304193713CD005
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL50892.1.
RefSeqiWP_014763062.1. NC_018000.1.

Genome annotation databases

EnsemblBacteriaiAFL50892; AFL50892; USDA257_c23120.
KEGGisfd:USDA257_c23120.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003563 Genomic DNA. Translation: AFL50892.1.
RefSeqiWP_014763062.1. NC_018000.1.

3D structure databases

ProteinModelPortaliI3X4T6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL50892; AFL50892; USDA257_c23120.
KEGGisfd:USDA257_c23120.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
    Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
    J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 257Imported.

Entry informationi

Entry nameiI3X4T6_RHIFR
AccessioniPrimary (citable) accession number: I3X4T6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: July 22, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.