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I3X4T6

- I3X4T6_RHIFR

UniProt

I3X4T6 - I3X4T6_RHIFR

Protein
Submitted name:

Putative ribulose bisphosphate carboxylase-like protein

Gene

USDA257_c23120

Organism
Sinorhizobium fredii USDA 257
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ribulose bisphosphate carboxylase-like proteinImported
    Gene namesi
    ORF Names:USDA257_c23120Imported
    OrganismiSinorhizobium fredii USDA 257Imported
    Taxonomic identifieri1185652 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000006180: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliI3X4T6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I3X4T6-1 [UniParc]FASTAAdd to Basket

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    MIRITYRIET PGDVVALAAK IASDQSTGTF VPVPGETEEL KARVAARVVA    50
    IRNLEPTDRP SWPEEAGEAK RFNRADADIE FPLDAVGTDL AALMTIAIGG 100
    VYSVKGMTGV RVVDMKLPPE FCAAHPGPQF GVAGSRRLTG VEEGPIIGTI 150
    VKPALGLRPE ETGELVGELL SSGVDFIKDD EKLMSPVYSP LKERIAAIMP 200
    RILNHEQKTG KKVMYAFGIS HTDPDEMMRN HDHVVQAGGN AGVVNINSIG 250
    MGGLGFLRKR SGIVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLIGVDQF 300
    QINGIRVKYW EPDESFVKSF KAVSTPLLSE RDCPLPVVGS GQWGGQAPET 350
    YARTGGSTDL LYLCGGGIVS HPGGAGAGVR AVRHAWEAAV AGIPLADYAK 400
    DHPELAQSLV KFADGKGT 418
    Length:418
    Mass (Da):44,876
    Last modified:September 5, 2012 - v1
    Checksum:i22304193713CD005
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003563 Genomic DNA. Translation: AFL50892.1.
    RefSeqiWP_014763062.1. NC_018000.1.
    YP_006397649.1. NC_018000.1.

    Genome annotation databases

    EnsemblBacteriaiAFL50892; AFL50892; USDA257_c23120.
    GeneIDi13067782.
    KEGGisfd:USDA257_c23120.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003563 Genomic DNA. Translation: AFL50892.1 .
    RefSeqi WP_014763062.1. NC_018000.1.
    YP_006397649.1. NC_018000.1.

    3D structure databases

    ProteinModelPortali I3X4T6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFL50892 ; AFL50892 ; USDA257_c23120 .
    GeneIDi 13067782.
    KEGGi sfd:USDA257_c23120.

    Phylogenomic databases

    KOi K01601.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
      Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
      J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: USDA 257Imported.

    Entry informationi

    Entry nameiI3X4T6_RHIFR
    AccessioniPrimary (citable) accession number: I3X4T6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3