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I3X3D5 (I3X3D5_RHIFR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.3.1.12 EMBL AFL50391.1
Gene names
Name:acoC2 EMBL AFL50391.1
Synonyms:acoC3 EMBL AFL50401.1
ORF Names:USDA257_c18040 EMBL AFL50391.1, USDA257_c18140 EMBL AFL50401.1
OrganismSinorhizobium fredii USDA 257 [Complete proteome] EMBL AFL50391.1
Taxonomic identifier1185652 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length375 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 lipoyl cofactor covalently By similarity. SAAS SAAS003016

Sequence similarities

Contains 1 lipoyl-binding domain. RuleBase RU000447

Contains lipoyl-binding domain. SAAS SAAS011053

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3X3D5 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 69E9BCE2CD556837

FASTA37538,993
        10         20         30         40         50         60 
MSSIEAVTVP KWGMTMTEGK ITQWMVGEGE HVTRGQEILE IETTKVTNVV EAAATGTLRR 

        70         80         90        100        110        120 
IVLKEGTTAP VGALAGVIAE AAATSEEIDA FIASYADRLG AGDEGDGGVP VPRTIAVDGG 

       130        140        150        160        170        180 
AVNVLEAGPQ GDETVVLLHG FGGDLSTWLF NQSALAENMR VVAIDLPGHG ASSPIAGGDV 

       190        200        210        220        230        240 
FPKIVSAVEA AVEAVAPGKL HLIAHSFGGA VAAAIAANRP SRVGSLTLIA PIGLSRQISR 

       250        260        270        280        290        300 
DFLVDFVAAE RRRPLLGVLE RLFADPSKIT SDMVEGTLRF KRLEGVPEAL SAIADTIADD 

       310        320        330        340        350        360 
NGQLQSIGDQ LQALTCPVTL IWGERDGIVP VPQQAEVPGN VQLRIIPGAG HMPQMEASSA 

       370 
VNEAIMENIQ RSSGI 

« Hide

References

[1]"Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 257 EMBL AFL50391.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003563 Genomic DNA. Translation: AFL50391.1.
CP003563 Genomic DNA. Translation: AFL50401.1.
RefSeqYP_006397148.1. NC_018000.1.
YP_006397158.1. NC_018000.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL50391; AFL50391; USDA257_c18040.
AFL50401; AFL50401; USDA257_c18140.
GeneID13063442.
13063448.
KEGGsfd:USDA257_c18040.
sfd:USDA257_c18140.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00627.

Family and domain databases

InterProIPR003016. 2-oxoA_DH_lipoyl-BS.
IPR000073. AB_hydrolase_1.
IPR000089. Biotin_lipoyl.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamPF00364. Biotin_lipoyl. 1 hit.
[Graphical view]
PRINTSPR00111. ABHYDROLASE.
SUPFAMSSF51230. SSF51230. 1 hit.
PROSITEPS50968. BIOTINYL_LIPOYL. 1 hit.
PS00189. LIPOYL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3X3D5_RHIFR
AccessionPrimary (citable) accession number: I3X3D5
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)