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I3X0K8

- I3X0K8_RHIFR

UniProt

I3X0K8 - I3X0K8_RHIFR

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Sinorhizobium fredii USDA 257
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    ORF Names:USDA257_c08220Imported
    OrganismiSinorhizobium fredii USDA 257Imported
    Taxonomic identifieri1185652 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000006180: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I3X0K8-1 [UniParc]FASTAAdd to Basket

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    MMIRVIIALA ATVGLAVAAF AQQSSQTATA EFVGKDGTDT GRATLTSGGK    50
    GVLIEMEVSG LPKDTWVAFH VHETGRCDVA GGFESAGKHF VGRDEGAEHG 100
    FLAAHGPHAG DMPNQYVGAD GVLRAQLFSS FVSLDDKATA IRGRALVIHA 150
    RSDDNRSQPA GDAGDRLACA VIK 173
    Length:173
    Mass (Da):17,932
    Last modified:September 5, 2012 - v1
    Checksum:iCC48B0BD2E9CC404
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003563 Genomic DNA. Translation: AFL49414.1.
    RefSeqiYP_006396171.1. NC_018000.1.

    Genome annotation databases

    EnsemblBacteriaiAFL49414; AFL49414; USDA257_c08220.
    GeneIDi13065856.
    KEGGisfd:USDA257_c08220.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003563 Genomic DNA. Translation: AFL49414.1 .
    RefSeqi YP_006396171.1. NC_018000.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFL49414 ; AFL49414 ; USDA257_c08220 .
    GeneIDi 13065856.
    KEGGi sfd:USDA257_c08220.

    Phylogenomic databases

    KOi K04565.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257."
      Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R.
      J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: USDA 257Imported.

    Entry informationi

    Entry nameiI3X0K8_RHIFR
    AccessioniPrimary (citable) accession number: I3X0K8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3