I3WYZ4 (I3WYZ4_RHIFR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

ORF Names:

USDA257_c02520 EMBL AFL48850.1

Organism

Sinorhizobium fredii USDA 257 EMBL AFL48850.1

Taxonomic identifier

1185652 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL AFL48850.1
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I3WYZ4 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: E152582DDBC2CF8C	FASTA	377	40,135
	10 20 30 40 50 60 MDRHALHIQG REAEAGAGAS GYLTIDLAAL RRNYQKLSAA VAPATVAAVV KADAYGLGAQ 70 80 90 100 110 120 QVSKALHAQG CRQFFVAHLA EAIELRSLLP NDTQIAVLNG LQPGAEITCA KANIVPVLNS 130 140 150 160 170 180 LEQFRRWSFT AQKLGRVLPT VLQFDTGMSR LGVPLQERTA LAAVLKDCRS IEILFIMSHL 190 200 210 220 230 240 ACADEVDNKQ NADQLAEMRL IAAEFADLDV CFANSGGVFL GRDYHGALSR PGIALYGGAP 250 260 270 280 290 300 IAGRPNPIEP VVRLDVAVIQ TRTVPAGTRV GYGGAHVTSA ETRLATIAAG YADGLPRSLS 310 320 330 340 350 360 DRGAVFFDGV RLPIVGRVSM DSITVDITAL PEGTLSLGSL VEVLGPHQTL EDVAEAAGTI 370 SYEILTGLGR RYERRYR

References

[1]

"Complete Genome Sequence of the Broad-Host-Range Strain Sinorhizobium fredii USDA257." Schuldes J., Rodriguez Orbegoso M., Schmeisser C., Krishnan H.B., Daniel R., Streit W.R. J. Bacteriol. 194:4483-4483(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: USDA 257 EMBL AFL48850.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003563 Genomic DNA. Translation: AFL48850.1.
RefSeq	YP_006395607.1. NC_018000.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFL48850; AFL48850; USDA257_c02520.
GeneID	13062665.
KEGG	sfd:USDA257_c02520.
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I3WYZ4_RHIFR

Accession

Primary (citable) accession number: I3WYZ4

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)