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Protein
Submitted name:

Sialidase

Gene

nedA

Organism
Bifidobacterium bifidum BGN4
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-(2->3)-sialidase activity Source: UniProtKB-EC
  2. exo-alpha-(2->6)-sialidase activity Source: UniProtKB-EC
  3. exo-alpha-(2->8)-sialidase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciBBIF484020:GL96-1845-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
SialidaseImported (EC:3.2.1.18Imported)
Gene namesi
Name:nedAImported
ORF Names:BBB_1792Imported
OrganismiBifidobacterium bifidum BGN4Imported
Taxonomic identifieri484020 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000006173 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

I3WKG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRKPCRPIG GTAVGAQSRD PALHRRGTHM VRSTKPSLLR RLGALVAAAA
60 70 80 90 100
MLVVLPAGVS TASAASDDTD MLTVTMTRTD ALGDEVYVGD TLTYSFTNTN
110 120 130 140 150
NTSSAFTAFP AESNLSGVLT TGTPNCRYEN LAGGASYPCS TASHTITADD
160 170 180 190 200
LTAGSFTPRT VWKATSDRGG TQVLQDNIVS TGDTVTVKEG KRPDPATIPT
210 220 230 240 250
DRADGEAVRL ATARQNLGTE CYRIPALAEA PNGWILAAFD QRPNTAMANG
260 270 280 290 300
SGVKCWDAPQ PNSIVQRISK DGGKSWTPIQ YVAQGKNAPD RYGYSDPSYV
310 320 330 340 350
VDEETGEIFL FFVHSYNKGF ADSQLGVDES NRNVLHAVVV SSKDNGETWS
360 370 380 390 400
KPRDITADIT KGYENEWKSR FATSGAGIQL KYGKYKGRLI QQYAVGRTTG
410 420 430 440 450
SNAAVSVYSD DHGKTWQAGN PVTGMLMDEN KVVELSDGRV MLNSRPGNGS
460 470 480 490 500
GYRRVAISKD GGMNYGTVKN ETQLPDPNNN AHITRAFPNA PEGSAKAKVL
510 520 530 540 550
LYSSPRANNE GRANGVVRIS LDDGTTWSSG KLYKEGSMAY SVITALSGAA
560 570 580 590 600
GGGYGLLYEG AWVTGGGIDS HDIMYTHISM DWLGYLSATA DDVTASVEEG
610 620 630 640 650
ASTVDVTVPV SNVGSVDYTG VTVTPADLPT GWSASPVNVG ALAGGASKDV
660 670 680 690 700
TVTVNVPATA TKDDVAKIVL RVTGTSAANA NATTGFDGSI TVNVTEKSEP
710 720 730 740 750
DPEPEPTITG VSAVTSQAGV KVGDVFDASK VSVTAAMSDG SSKALAAGEY
760 770 780 790 800
SLSAVDADGK AVDLAEPFAA AGVVTVTVSV PVEGANPLTA SFTIDVAEKS
810 820 830 840 850
VDPEPKPEPE PKPEPEKPAG PKVDVPTEQP GLSKTGASTA GMSIVFVLLA
860
LSGVAALSLR RRSVH
Length:865
Mass (Da):90,150
Last modified:September 5, 2012 - v1
Checksum:iD828F55761DA21A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001361 Genomic DNA. Translation: AFL05382.1.
RefSeqiWP_014760775.1. NC_017999.1.
YP_006395261.1. NC_017999.1.

Genome annotation databases

EnsemblBacteriaiAFL05382; AFL05382; BBB_1792.
KEGGibbf:BBB_1792.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001361 Genomic DNA. Translation: AFL05382.1.
RefSeqiWP_014760775.1. NC_017999.1.
YP_006395261.1. NC_017999.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL05382; AFL05382; BBB_1792.
KEGGibbf:BBB_1792.

Phylogenomic databases

KOiK01186.

Enzyme and pathway databases

BioCyciBBIF484020:GL96-1845-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Probiotic Bacterium Bifidobacterium bifidum Strain BGN4."
    Yu D.S., Jeong H., Lee D.H., Kwon S.K., Song J.Y., Kim B.K., Park M.S., Ji G.E., Oh T.K., Kim J.F.
    J. Bacteriol. 194:4757-4758(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BGN4Imported.

Entry informationi

Entry nameiI3WKG9_BIFBI
AccessioniPrimary (citable) accession number: I3WKG9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 1, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.