Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I3WJJ9 (I3WJJ9_BIFBI) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase HAMAP-Rule MF_01039

Short name=BPG-dependent PGAM HAMAP-Rule MF_01039
Short name=PGAM HAMAP-Rule MF_01039
Short name=Phosphoglyceromutase HAMAP-Rule MF_01039
Short name=dPGM HAMAP-Rule MF_01039
EC=5.4.2.11 HAMAP-Rule MF_01039
Gene names
Name:gpmA HAMAP-Rule MF_01039 EMBL AFL05062.1
ORF Names:BBB_1471 EMBL AFL05062.1
OrganismBifidobacterium bifidum BGN4 [Complete proteome] EMBL AFL05062.1
Taxonomic identifier484020 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length246 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate By similarity. RuleBase RU004512 HAMAP-Rule MF_01039

Catalytic activity

2-phospho-D-glycerate = 3-phospho-D-glycerate. RuleBase RU004512 HAMAP-Rule MF_01039 SAAS SAAS001345

Pathway

Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 3/5. RuleBase RU004512 HAMAP-Rule MF_01039

Sequence similarities

Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily. HAMAP-Rule MF_01039

Ontologies

Keywords
   Biological processGlycolysis HAMAP-Rule MF_01039 SAAS SAAS001345
   Molecular functionIsomerase HAMAP-Rule MF_01039 SAAS SAAS001345 EMBL AFL05062.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycolysis

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region22 – 2322-phospho-D-glycerate binding By similarity HAMAP-Rule MF_01039
Region88 – 9142-phospho-D-glycerate binding By similarity HAMAP-Rule MF_01039
Region115 – 11622-phospho-D-glycerate binding By similarity HAMAP-Rule MF_01039

Sites

Active site101Tele-phosphohistidine intermediate By similarity HAMAP-Rule MF_01039
Active site1801 By similarity HAMAP-Rule MF_01039
Binding site1612-phospho-D-glycerate By similarity HAMAP-Rule MF_01039
Binding site6112-phospho-D-glycerate By similarity HAMAP-Rule MF_01039
Binding site9912-phospho-D-glycerate By similarity HAMAP-Rule MF_01039
Binding site18212-phospho-D-glycerate By similarity HAMAP-Rule MF_01039

Sequences

Sequence LengthMass (Da)Tools
I3WJJ9 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 55D75151C543DBA1

FASTA24627,627
        10         20         30         40         50         60 
MTYKLVLLRH GQSAWNKTNQ FTGWVDVPLT EQGEAEAKRG GELLKEKNVL PDIVFTSLLR 

        70         80         90        100        110        120 
RAINTANIAL DAADRLWIPV QRDWRLNERH YGALQGKNKT EIRQEYGDEK FMLWRRSYAT 

       130        140        150        160        170        180 
PPPEIDPNDQ YAQNHDPRYA GDPVPEAECL ANVVERVKPY FESAIEPELR AGKTVLIAAH 

       190        200        210        220        230        240 
GNSLRAIVKM LDNLSEDEIA KVNIPTAIPL LYELDENFKP VKPRGEYLDP EAAAAGAAAV 


AAQGQK 

« Hide

References

[1]"Complete Genome Sequence of the Probiotic Bacterium Bifidobacterium bifidum Strain BGN4."
Yu D.S., Jeong H., Lee D.H., Kwon S.K., Song J.Y., Kim B.K., Park M.S., Ji G.E., Oh T.K., Kim J.F.
J. Bacteriol. 194:4757-4758(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BGN4 EMBL AFL05062.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001361 Genomic DNA. Translation: AFL05062.1.
RefSeqYP_006394941.1. NC_017999.1.

3D structure databases

ProteinModelPortalI3WJJ9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFL05062; AFL05062; BBB_1471.
GeneID13070115.
KEGGbbf:BBB_1471.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01834.

Enzyme and pathway databases

BioCycBBIF484020:GL96-1514-MONOMER.
UniPathwayUPA00109; UER00186.

Family and domain databases

HAMAPMF_01039. PGAM_GpmA.
InterProIPR013078. His_Pase_superF_clade-1.
IPR001345. PG/BPGM_mutase_AS.
IPR005952. Phosphogly_mut1.
[Graphical view]
PANTHERPTHR11931. PTHR11931. 1 hit.
PfamPF00300. His_Phos_1. 1 hit.
[Graphical view]
SMARTSM00855. PGAM. 1 hit.
[Graphical view]
TIGRFAMsTIGR01258. pgm_1. 1 hit.
PROSITEPS00175. PG_MUTASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3WJJ9_BIFBI
AccessionPrimary (citable) accession number: I3WJJ9
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: February 19, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)