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I3WHS4

- I3WHS4_BIFBI

UniProt

I3WHS4 - I3WHS4_BIFBI

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Protein
Submitted name:

Putative amino transferase

Gene

BBB_0844

Organism
Bifidobacterium bifidum BGN4
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. sequence-specific DNA binding Source: InterPro
  3. transferase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciBBIF484020:GL96-866-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative amino transferaseImported
Gene namesi
ORF Names:BBB_0844Imported
OrganismiBifidobacterium bifidum BGN4Imported
Taxonomic identifieri484020 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000006173: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK14260.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
PF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

I3WHS4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNARHLRQVD IVRAAQASGV KLGKSHISQY VSGKTTPRAD TLRFLADTLQ
60 70 80 90 100
VDEQWLLGHD RGRPDMPAQP KRVSDNPGGR ADAPRTPSPQ TPSSQAPAPQ
110 120 130 140 150
TTSPSHEPEG TPMRHFNKST KLDNVLYDVR GPVVDEAARM EQSGMHVLKL
160 170 180 190 200
NIGNPAPFGF RTPDEVVYDM SRQLSDTEGY SASKGLFSAR KAIMQYAQLK
210 220 230 240 250
NLPNVGIEDI YTGNGVSELI NLSLSALLDN GDEVLVPSPD YPLWTACVNL
260 270 280 290 300
AGGTAVHYVC DEESEWYPDI DDMRSKITDR TVAIVLINPN NPTGALYPKE
310 320 330 340 350
VLQQIVDLAR EHQLMIFSDE IYDRLVMDGL QHVSIASMAP DLFCVTFSGL
360 370 380 390 400
SKSHMIAGYR IGWMVLSGNK SIAKDYVEGI NMLTNMRICS NVPAQSIVQT
410 420 430 440 450
ALGGHQSVND YIVPGGRLYE QREYIYNALN SIPGVTAVKP KAAFYIFPKL
460 470 480 490 500
DVKKFNITDD EQFALDLLHD KRILITRGGG FNWHEPDHFR IVYLPRIEVL
510
KDATEKLTDF LSCYRQ
Length:516
Mass (Da):57,389
Last modified:September 5, 2012 - v1
Checksum:iE49EA8094994FF83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001361 Genomic DNA. Translation: AFL04437.1.
RefSeqiWP_014760169.1. NC_017999.1.
YP_006394316.1. NC_017999.1.

Genome annotation databases

EnsemblBacteriaiAFL04437; AFL04437; BBB_0844.
GeneIDi13069833.
KEGGibbf:BBB_0844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001361 Genomic DNA. Translation: AFL04437.1 .
RefSeqi WP_014760169.1. NC_017999.1.
YP_006394316.1. NC_017999.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFL04437 ; AFL04437 ; BBB_0844 .
GeneIDi 13069833.
KEGGi bbf:BBB_0844.

Phylogenomic databases

KOi K14260.

Enzyme and pathway databases

BioCyci BBIF484020:GL96-866-MONOMER.

Family and domain databases

Gene3Di 1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
PF01381. HTH_3. 1 hit.
[Graphical view ]
SMARTi SM00530. HTH_XRE. 1 hit.
[Graphical view ]
SUPFAMi SSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Probiotic Bacterium Bifidobacterium bifidum Strain BGN4."
    Yu D.S., Jeong H., Lee D.H., Kwon S.K., Song J.Y., Kim B.K., Park M.S., Ji G.E., Oh T.K., Kim J.F.
    J. Bacteriol. 194:4757-4758(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BGN4Imported.

Entry informationi

Entry nameiI3WHS4_BIFBI
AccessioniPrimary (citable) accession number: I3WHS4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3