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I3WHS4

- I3WHS4_BIFBI

UniProt

I3WHS4 - I3WHS4_BIFBI

Protein
Submitted name:

Putative amino transferase

Gene

BBB_0844

Organism
Bifidobacterium bifidum BGN4
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. sequence-specific DNA binding Source: InterPro
    3. transferase activity Source: UniProtKB-KW

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    TransferaseImported

    Enzyme and pathway databases

    BioCyciBBIF484020:GL96-866-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative amino transferaseImported
    Gene namesi
    ORF Names:BBB_0844Imported
    OrganismiBifidobacterium bifidum BGN4Imported
    Taxonomic identifieri484020 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000006173: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK14260.

    Family and domain databases

    Gene3Di1.10.260.40. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR001387. Cro/C1-type_HTH.
    IPR010982. Lambda_DNA-bd_dom.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    PF01381. HTH_3. 1 hit.
    [Graphical view]
    SMARTiSM00530. HTH_XRE. 1 hit.
    [Graphical view]
    SUPFAMiSSF47413. SSF47413. 1 hit.
    SSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I3WHS4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNARHLRQVD IVRAAQASGV KLGKSHISQY VSGKTTPRAD TLRFLADTLQ    50
    VDEQWLLGHD RGRPDMPAQP KRVSDNPGGR ADAPRTPSPQ TPSSQAPAPQ 100
    TTSPSHEPEG TPMRHFNKST KLDNVLYDVR GPVVDEAARM EQSGMHVLKL 150
    NIGNPAPFGF RTPDEVVYDM SRQLSDTEGY SASKGLFSAR KAIMQYAQLK 200
    NLPNVGIEDI YTGNGVSELI NLSLSALLDN GDEVLVPSPD YPLWTACVNL 250
    AGGTAVHYVC DEESEWYPDI DDMRSKITDR TVAIVLINPN NPTGALYPKE 300
    VLQQIVDLAR EHQLMIFSDE IYDRLVMDGL QHVSIASMAP DLFCVTFSGL 350
    SKSHMIAGYR IGWMVLSGNK SIAKDYVEGI NMLTNMRICS NVPAQSIVQT 400
    ALGGHQSVND YIVPGGRLYE QREYIYNALN SIPGVTAVKP KAAFYIFPKL 450
    DVKKFNITDD EQFALDLLHD KRILITRGGG FNWHEPDHFR IVYLPRIEVL 500
    KDATEKLTDF LSCYRQ 516
    Length:516
    Mass (Da):57,389
    Last modified:September 5, 2012 - v1
    Checksum:iE49EA8094994FF83
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001361 Genomic DNA. Translation: AFL04437.1.
    RefSeqiWP_014760169.1. NC_017999.1.
    YP_006394316.1. NC_017999.1.

    Genome annotation databases

    EnsemblBacteriaiAFL04437; AFL04437; BBB_0844.
    GeneIDi13069833.
    KEGGibbf:BBB_0844.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001361 Genomic DNA. Translation: AFL04437.1 .
    RefSeqi WP_014760169.1. NC_017999.1.
    YP_006394316.1. NC_017999.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFL04437 ; AFL04437 ; BBB_0844 .
    GeneIDi 13069833.
    KEGGi bbf:BBB_0844.

    Phylogenomic databases

    KOi K14260.

    Enzyme and pathway databases

    BioCyci BBIF484020:GL96-866-MONOMER.

    Family and domain databases

    Gene3Di 1.10.260.40. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR001387. Cro/C1-type_HTH.
    IPR010982. Lambda_DNA-bd_dom.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    PF01381. HTH_3. 1 hit.
    [Graphical view ]
    SMARTi SM00530. HTH_XRE. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47413. SSF47413. 1 hit.
    SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Probiotic Bacterium Bifidobacterium bifidum Strain BGN4."
      Yu D.S., Jeong H., Lee D.H., Kwon S.K., Song J.Y., Kim B.K., Park M.S., Ji G.E., Oh T.K., Kim J.F.
      J. Bacteriol. 194:4757-4758(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BGN4Imported.

    Entry informationi

    Entry nameiI3WHS4_BIFBI
    AccessioniPrimary (citable) accession number: I3WHS4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3