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Protein
Submitted name:

Putative amino transferase

Gene

BBB_0844

Organism
Bifidobacterium bifidum BGN4
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciBBIF484020:GL96-866-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative amino transferaseImported
Gene namesi
ORF Names:BBB_0844Imported
OrganismiBifidobacterium bifidum BGN4Imported
Taxonomic identifieri484020 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000006173 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK14260.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
PF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

I3WHS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNARHLRQVD IVRAAQASGV KLGKSHISQY VSGKTTPRAD TLRFLADTLQ
60 70 80 90 100
VDEQWLLGHD RGRPDMPAQP KRVSDNPGGR ADAPRTPSPQ TPSSQAPAPQ
110 120 130 140 150
TTSPSHEPEG TPMRHFNKST KLDNVLYDVR GPVVDEAARM EQSGMHVLKL
160 170 180 190 200
NIGNPAPFGF RTPDEVVYDM SRQLSDTEGY SASKGLFSAR KAIMQYAQLK
210 220 230 240 250
NLPNVGIEDI YTGNGVSELI NLSLSALLDN GDEVLVPSPD YPLWTACVNL
260 270 280 290 300
AGGTAVHYVC DEESEWYPDI DDMRSKITDR TVAIVLINPN NPTGALYPKE
310 320 330 340 350
VLQQIVDLAR EHQLMIFSDE IYDRLVMDGL QHVSIASMAP DLFCVTFSGL
360 370 380 390 400
SKSHMIAGYR IGWMVLSGNK SIAKDYVEGI NMLTNMRICS NVPAQSIVQT
410 420 430 440 450
ALGGHQSVND YIVPGGRLYE QREYIYNALN SIPGVTAVKP KAAFYIFPKL
460 470 480 490 500
DVKKFNITDD EQFALDLLHD KRILITRGGG FNWHEPDHFR IVYLPRIEVL
510
KDATEKLTDF LSCYRQ
Length:516
Mass (Da):57,389
Last modified:September 5, 2012 - v1
Checksum:iE49EA8094994FF83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001361 Genomic DNA. Translation: AFL04437.1.
RefSeqiWP_014760169.1. NC_017999.1.
YP_006394316.1. NC_017999.1.

Genome annotation databases

EnsemblBacteriaiAFL04437; AFL04437; BBB_0844.
KEGGibbf:BBB_0844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001361 Genomic DNA. Translation: AFL04437.1.
RefSeqiWP_014760169.1. NC_017999.1.
YP_006394316.1. NC_017999.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL04437; AFL04437; BBB_0844.
KEGGibbf:BBB_0844.

Phylogenomic databases

KOiK14260.

Enzyme and pathway databases

BioCyciBBIF484020:GL96-866-MONOMER.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
PF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Probiotic Bacterium Bifidobacterium bifidum Strain BGN4."
    Yu D.S., Jeong H., Lee D.H., Kwon S.K., Song J.Y., Kim B.K., Park M.S., Ji G.E., Oh T.K., Kim J.F.
    J. Bacteriol. 194:4757-4758(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BGN4Imported.

Entry informationi

Entry nameiI3WHS4_BIFBI
AccessioniPrimary (citable) accession number: I3WHS4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: June 24, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.