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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Tsac_1306

Organism
Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTSAC1094508:GLMA-1330-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Tsac_1306Imported
OrganismiThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)Imported
Taxonomic identifieri1094508 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
ProteomesiUP000006178 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiATYNIFD.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3VUX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMMDEKIPP MLAISGNVFD DPNWVYEIKW DGSRTIAFLS SSTKLQDRRL
60 70 80 90 100
VNISHQFPEL MNINKCLKSN EAILDGELIV LKDNKPSYRN IMMRKHQQNK
110 120 130 140 150
LRIELLSKSN PAIFITWDVI YVDGKELLNY PLIERREILS KIVSESNLIR
160 170 180 190 200
ISDYIFGHGK TLFAETGKKQ LEGVMAKKAD SKYYLGKRSS LWQKFKHHIV
210 220 230 240 250
LNAVILGYMI DKTALVLGLY NEEDKLVHIG NVESGISQKE LSSFLYVAND
260 270 280 290 300
LKVGSEFYGL AINNVQWIMP FIVCKVKFME WSENFKMRAP SFLEFALDVK

PTECRFM
Length:307
Mass (Da):35,506
Last modified:September 5, 2012 - v1
Checksum:iDAD5EBC1EA45C90F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003184 Genomic DNA. Translation: AFK86317.1.
RefSeqiYP_006391916.1. NC_017992.1.

Genome annotation databases

EnsemblBacteriaiAFK86317; AFK86317; Tsac_1306.
GeneIDi13072132.
KEGGitsh:Tsac_1306.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003184 Genomic DNA. Translation: AFK86317.1.
RefSeqiYP_006391916.1. NC_017992.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFK86317; AFK86317; Tsac_1306.
GeneIDi13072132.
KEGGitsh:Tsac_1306.

Phylogenomic databases

KOiK01971.
OMAiATYNIFD.

Enzyme and pathway databases

BioCyciTSAC1094508:GLMA-1330-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Thermoanaerobacterium saccharolyticum JW/SL-YS485."
    Brown S.D., Land M.L., Herring C.D.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 8691 / JW/SL-YS485Imported.

Entry informationi

Entry nameiI3VUX2_THESW
AccessioniPrimary (citable) accession number: I3VUX2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: March 4, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.