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I3VUX2 (I3VUX2_THESW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFK86317.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I3VUX2 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: DAD5EBC1EA45C90F

FASTA30735,506
        10         20         30         40         50         60 
MSMMDEKIPP MLAISGNVFD DPNWVYEIKW DGSRTIAFLS SSTKLQDRRL VNISHQFPEL 

        70         80         90        100        110        120 
MNINKCLKSN EAILDGELIV LKDNKPSYRN IMMRKHQQNK LRIELLSKSN PAIFITWDVI 

       130        140        150        160        170        180 
YVDGKELLNY PLIERREILS KIVSESNLIR ISDYIFGHGK TLFAETGKKQ LEGVMAKKAD 

       190        200        210        220        230        240 
SKYYLGKRSS LWQKFKHHIV LNAVILGYMI DKTALVLGLY NEEDKLVHIG NVESGISQKE 

       250        260        270        280        290        300 
LSSFLYVAND LKVGSEFYGL AINNVQWIMP FIVCKVKFME WSENFKMRAP SFLEFALDVK 


PTECRFM 

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References

[1]"Thermoanaerobacterium saccharolyticum JW/SL-YS485."
Brown S.D., Land M.L., Herring C.D.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 8691 / JW/SL-YS485.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003184 Genomic DNA. Translation: AFK86317.1.
RefSeqYP_006391916.1. NC_017992.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK86317; AFK86317; Tsac_1306.
GeneID13072132.
KEGGtsh:Tsac_1306.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAPFPPMEA.

Enzyme and pathway databases

BioCycTSAC1094508:GLMA-1330-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3VUX2_THESW
AccessionPrimary (citable) accession number: I3VUX2
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: May 14, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)