Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

I3VTW0

- I3VTW0_THESW

UniProt

I3VTW0 - I3VTW0_THESW

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Parallel beta-helix repeat protein

Gene

Tsac_0939

Organism
Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciTSAC1094508:GLMA-950-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Parallel beta-helix repeat proteinImported
Gene namesi
Ordered Locus Names:Tsac_0939Imported
OrganismiThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)Imported
Taxonomic identifieri1094508 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
ProteomesiUP000006178: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VSTX-ray1.75A/B/C/D1-638[»]
3VSUX-ray2.05A/B/C/D1-638[»]
3VSVX-ray1.48A/B/C/D1-638[»]
ProteinModelPortaliI3VTW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiHDAKCSA.

Family and domain databases

Gene3Di2.160.20.10. 3 hits.
InterProiIPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
SMARTiSM00710. PbH1. 5 hits.
[Graphical view]
SUPFAMiSSF51126. SSF51126. 2 hits.

Sequencei

Sequence statusi: Complete.

I3VTW0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEYHVAKTGS DEGKGTLKDP FLTINKAASV AMAGDTIIVH EGVYREWVKP
60 70 80 90 100
KYKGLSDKRR ITYKAAEGEK VVIKGSERIQ SWQRVEGNVW RCQLPNSFFG
110 120 130 140 150
EFNPYKEEVF GDWLLTVNEK KHLGDVYLNG MSFYEVTNYE DLFNPQLRTE
160 170 180 190 200
VLDHWTQKIV PIKNAEQTKY VWYAEVDREK TTIYANFQGA DPNEEFVEIN
210 220 230 240 250
VRRSCFYPVE TGIDYITVKG FEMAHAATPW APPTADQPGL IGPNWSKGWI
260 270 280 290 300
IEDNIIHDAK CSAISIGKEA TTGNNYRSIR KDKPGYQYQL EAVFNAKRNG
310 320 330 340 350
WSKEKIGSHI IRNNTIYDCG QNAIVGHLGG VFSEIYNNHI YNIALKREFY
360 370 380 390 400
GHEIAGIKLH AAIDVQIHHN RIHDCSLGLW LDWEAQGTRV SKNLFYNNNR
410 420 430 440 450
DVFVEVSHGP YLVDHNILSS EYAIDNMSQG GAYINNLIAG KMNQRKVLNR
460 470 480 490 500
STQYHLPHST EVAGFAFVYG GDDRFYNNIF IGKEGLENVG TSHYNNCTTS
510 520 530 540 550
LEEYIEKVNE VPGDLGEFER VEQPVYINKN AYFNGAEPFE KEKDNLVKKD
560 570 580 590 600
FDPKLAIIDE GDEVYLSLQL PDEFENIVGD IHSTKTLERV RIVDAEYESP
610 620 630
DGKELVLDTD YLDAKKPENS SIGPIALLKK GNNYIKVW
Length:638
Mass (Da):72,755
Last modified:September 5, 2012 - v1
Checksum:i6C0A94703E599F8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003184 Genomic DNA. Translation: AFK85955.1.
RefSeqiYP_006391554.1. NC_017992.1.

Genome annotation databases

EnsemblBacteriaiAFK85955; AFK85955; Tsac_0939.
GeneIDi13071752.
KEGGitsh:Tsac_0939.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003184 Genomic DNA. Translation: AFK85955.1 .
RefSeqi YP_006391554.1. NC_017992.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3VST X-ray 1.75 A/B/C/D 1-638 [» ]
3VSU X-ray 2.05 A/B/C/D 1-638 [» ]
3VSV X-ray 1.48 A/B/C/D 1-638 [» ]
ProteinModelPortali I3VTW0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFK85955 ; AFK85955 ; Tsac_0939 .
GeneIDi 13071752.
KEGGi tsh:Tsac_0939.

Phylogenomic databases

OMAi HDAKCSA.

Enzyme and pathway databases

BioCyci TSAC1094508:GLMA-950-MONOMER.

Family and domain databases

Gene3Di 2.160.20.10. 3 hits.
InterProi IPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view ]
SMARTi SM00710. PbH1. 5 hits.
[Graphical view ]
SUPFAMi SSF51126. SSF51126. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Thermoanaerobacterium saccharolyticum JW/SL-YS485."
    Brown S.D., Land M.L., Herring C.D.
    Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 8691 / JW/SL-YS485Imported.
  2. "The substrate/product-binding modes of a novel GH120 ?-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485."
    Huang C.H., Sun Y., Ko T.P., Chen C.C., Zheng Y., Chan H.C., Pang X., Wiegel J., Shao W., Guo R.T.
    Biochem. J. 448:401-407(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.48 ANGSTROMS).

Entry informationi

Entry nameiI3VTW0_THESW
AccessioniPrimary (citable) accession number: I3VTW0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 29, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3