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I3VTW0

- I3VTW0_THESW

UniProt

I3VTW0 - I3VTW0_THESW

Protein
Submitted name:

Parallel beta-helix repeat protein

Gene

Tsac_0939

Organism
Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciTSAC1094508:GLMA-950-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Parallel beta-helix repeat proteinImported
    Gene namesi
    Ordered Locus Names:Tsac_0939Imported
    OrganismiThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)Imported
    Taxonomic identifieri1094508 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
    ProteomesiUP000006178: Chromosome

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3VSTX-ray1.75A/B/C/D1-638[»]
    3VSUX-ray2.05A/B/C/D1-638[»]
    3VSVX-ray1.48A/B/C/D1-638[»]
    ProteinModelPortaliI3VTW0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OMAiHDAKCSA.

    Family and domain databases

    Gene3Di2.160.20.10. 3 hits.
    InterProiIPR006626. PbH1.
    IPR012334. Pectin_lyas_fold.
    IPR011050. Pectin_lyase_fold/virulence.
    [Graphical view]
    SMARTiSM00710. PbH1. 5 hits.
    [Graphical view]
    SUPFAMiSSF51126. SSF51126. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    I3VTW0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEYHVAKTGS DEGKGTLKDP FLTINKAASV AMAGDTIIVH EGVYREWVKP    50
    KYKGLSDKRR ITYKAAEGEK VVIKGSERIQ SWQRVEGNVW RCQLPNSFFG 100
    EFNPYKEEVF GDWLLTVNEK KHLGDVYLNG MSFYEVTNYE DLFNPQLRTE 150
    VLDHWTQKIV PIKNAEQTKY VWYAEVDREK TTIYANFQGA DPNEEFVEIN 200
    VRRSCFYPVE TGIDYITVKG FEMAHAATPW APPTADQPGL IGPNWSKGWI 250
    IEDNIIHDAK CSAISIGKEA TTGNNYRSIR KDKPGYQYQL EAVFNAKRNG 300
    WSKEKIGSHI IRNNTIYDCG QNAIVGHLGG VFSEIYNNHI YNIALKREFY 350
    GHEIAGIKLH AAIDVQIHHN RIHDCSLGLW LDWEAQGTRV SKNLFYNNNR 400
    DVFVEVSHGP YLVDHNILSS EYAIDNMSQG GAYINNLIAG KMNQRKVLNR 450
    STQYHLPHST EVAGFAFVYG GDDRFYNNIF IGKEGLENVG TSHYNNCTTS 500
    LEEYIEKVNE VPGDLGEFER VEQPVYINKN AYFNGAEPFE KEKDNLVKKD 550
    FDPKLAIIDE GDEVYLSLQL PDEFENIVGD IHSTKTLERV RIVDAEYESP 600
    DGKELVLDTD YLDAKKPENS SIGPIALLKK GNNYIKVW 638
    Length:638
    Mass (Da):72,755
    Last modified:September 5, 2012 - v1
    Checksum:i6C0A94703E599F8C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003184 Genomic DNA. Translation: AFK85955.1.
    RefSeqiYP_006391554.1. NC_017992.1.

    Genome annotation databases

    EnsemblBacteriaiAFK85955; AFK85955; Tsac_0939.
    GeneIDi13071752.
    KEGGitsh:Tsac_0939.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003184 Genomic DNA. Translation: AFK85955.1 .
    RefSeqi YP_006391554.1. NC_017992.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3VST X-ray 1.75 A/B/C/D 1-638 [» ]
    3VSU X-ray 2.05 A/B/C/D 1-638 [» ]
    3VSV X-ray 1.48 A/B/C/D 1-638 [» ]
    ProteinModelPortali I3VTW0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFK85955 ; AFK85955 ; Tsac_0939 .
    GeneIDi 13071752.
    KEGGi tsh:Tsac_0939.

    Phylogenomic databases

    OMAi HDAKCSA.

    Enzyme and pathway databases

    BioCyci TSAC1094508:GLMA-950-MONOMER.

    Family and domain databases

    Gene3Di 2.160.20.10. 3 hits.
    InterProi IPR006626. PbH1.
    IPR012334. Pectin_lyas_fold.
    IPR011050. Pectin_lyase_fold/virulence.
    [Graphical view ]
    SMARTi SM00710. PbH1. 5 hits.
    [Graphical view ]
    SUPFAMi SSF51126. SSF51126. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Thermoanaerobacterium saccharolyticum JW/SL-YS485."
      Brown S.D., Land M.L., Herring C.D.
      Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 8691 / JW/SL-YS485Imported.
    2. "The substrate/product-binding modes of a novel GH120 ?-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485."
      Huang C.H., Sun Y., Ko T.P., Chen C.C., Zheng Y., Chan H.C., Pang X., Wiegel J., Shao W., Guo R.T.
      Biochem. J. 448:401-407(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.48 ANGSTROMS).

    Entry informationi

    Entry nameiI3VTW0_THESW
    AccessioniPrimary (citable) accession number: I3VTW0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3