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I3VTW0

- I3VTW0_THESW

UniProt

I3VTW0 - I3VTW0_THESW

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Protein
Submitted name: Parallel beta-helix repeat protein
Gene
Tsac_0939
Organism
Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciTSAC1094508:GLMA-950-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Parallel beta-helix repeat proteinImported
Gene namesi
Ordered Locus Names:Tsac_0939Imported
OrganismiThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)Imported
Taxonomic identifieri1094508 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
ProteomesiUP000006178: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VSTX-ray1.75A/B/C/D1-638[»]
3VSUX-ray2.05A/B/C/D1-638[»]
3VSVX-ray1.48A/B/C/D1-638[»]
ProteinModelPortaliI3VTW0.

Family & Domainsi

Phylogenomic databases

OMAiHDAKCSA.

Family and domain databases

Gene3Di2.160.20.10. 3 hits.
InterProiIPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
SMARTiSM00710. PbH1. 5 hits.
[Graphical view]
SUPFAMiSSF51126. SSF51126. 2 hits.

Sequencei

Sequence statusi: Complete.

I3VTW0-1 [UniParc]FASTAAdd to Basket

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MEYHVAKTGS DEGKGTLKDP FLTINKAASV AMAGDTIIVH EGVYREWVKP    50
KYKGLSDKRR ITYKAAEGEK VVIKGSERIQ SWQRVEGNVW RCQLPNSFFG 100
EFNPYKEEVF GDWLLTVNEK KHLGDVYLNG MSFYEVTNYE DLFNPQLRTE 150
VLDHWTQKIV PIKNAEQTKY VWYAEVDREK TTIYANFQGA DPNEEFVEIN 200
VRRSCFYPVE TGIDYITVKG FEMAHAATPW APPTADQPGL IGPNWSKGWI 250
IEDNIIHDAK CSAISIGKEA TTGNNYRSIR KDKPGYQYQL EAVFNAKRNG 300
WSKEKIGSHI IRNNTIYDCG QNAIVGHLGG VFSEIYNNHI YNIALKREFY 350
GHEIAGIKLH AAIDVQIHHN RIHDCSLGLW LDWEAQGTRV SKNLFYNNNR 400
DVFVEVSHGP YLVDHNILSS EYAIDNMSQG GAYINNLIAG KMNQRKVLNR 450
STQYHLPHST EVAGFAFVYG GDDRFYNNIF IGKEGLENVG TSHYNNCTTS 500
LEEYIEKVNE VPGDLGEFER VEQPVYINKN AYFNGAEPFE KEKDNLVKKD 550
FDPKLAIIDE GDEVYLSLQL PDEFENIVGD IHSTKTLERV RIVDAEYESP 600
DGKELVLDTD YLDAKKPENS SIGPIALLKK GNNYIKVW 638
Length:638
Mass (Da):72,755
Last modified:September 5, 2012 - v1
Checksum:i6C0A94703E599F8C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003184 Genomic DNA. Translation: AFK85955.1.
RefSeqiYP_006391554.1. NC_017992.1.

Genome annotation databases

EnsemblBacteriaiAFK85955; AFK85955; Tsac_0939.
GeneIDi13071752.
KEGGitsh:Tsac_0939.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003184 Genomic DNA. Translation: AFK85955.1 .
RefSeqi YP_006391554.1. NC_017992.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3VST X-ray 1.75 A/B/C/D 1-638 [» ]
3VSU X-ray 2.05 A/B/C/D 1-638 [» ]
3VSV X-ray 1.48 A/B/C/D 1-638 [» ]
ProteinModelPortali I3VTW0.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFK85955 ; AFK85955 ; Tsac_0939 .
GeneIDi 13071752.
KEGGi tsh:Tsac_0939.

Phylogenomic databases

OMAi HDAKCSA.

Enzyme and pathway databases

BioCyci TSAC1094508:GLMA-950-MONOMER.

Family and domain databases

Gene3Di 2.160.20.10. 3 hits.
InterProi IPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view ]
SMARTi SM00710. PbH1. 5 hits.
[Graphical view ]
SUPFAMi SSF51126. SSF51126. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Thermoanaerobacterium saccharolyticum JW/SL-YS485."
    Brown S.D., Land M.L., Herring C.D.
    Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 8691 / JW/SL-YS485.
  2. "The substrate/product-binding modes of a novel GH120 ?-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485."
    Huang C.H., Sun Y., Ko T.P., Chen C.C., Zheng Y., Chan H.C., Pang X., Wiegel J., Shao W., Guo R.T.
    Biochem. J. 448:401-407(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.48 ANGSTROMS).

Entry informationi

Entry nameiI3VTW0_THESW
AccessioniPrimary (citable) accession number: I3VTW0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 16, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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