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I3V1B4

- I3V1B4_PSEPU

UniProt

I3V1B4 - I3V1B4_PSEPU

Protein
Submitted name:

RuBisCO-like protein

Gene

YSA_08807

Organism
Pseudomonas putida ND6
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Enzyme and pathway databases

    BioCyciPPUT231023:GLIT-4838-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    RuBisCO-like proteinImported
    Gene namesi
    ORF Names:YSA_08807Imported
    OrganismiPseudomonas putida ND6Imported
    Taxonomic identifieri231023 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000005268: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliI3V1B4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I3V1B4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVDHKAGREE FTARFFVESS YPIERVSEVI AGEQSSGTFL SLPGESAELK    50
    ERSRARVVAI EPLPSVSSPS LHSDYLARHN PSETYHRGEV TIAFPTANIG 100
    TNIPALLTTI AGNLFEIGEV SGLRVLDLEL PERFASGFIG PQFGIEGTRA 150
    LAGVHDRPII GTIVKPSIGL TPEQTASVVD ELCAGGIDFI KDDELLIDPT 200
    YASFDARLGA VMPVLHKHAD RLGRMPMYAI NISGSIDEMM RRQDAVLEAG 250
    GTCVMLCLNW VGHSAVEHIR KHAQLPIHGH RNGWGALTRY PQLGFSFEVY 300
    QKIWRLAGID HLHVNGIQGK FYEADDSVIS SAKSCLAPFA GMRPLMPVFS 350
    SGQWAGQAPE LFNRLQSVDL MHLAGGGIIG HPMGIEAGVQ SMREGWEAAV 400
    QHVPLERYAE GRPALSAALQ KFGGN 425
    Length:425
    Mass (Da):46,135
    Last modified:September 5, 2012 - v1
    Checksum:i4D2F8ACA673EA2ED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003588 Genomic DNA. Translation: AFK71535.1.
    RefSeqiYP_006388650.1. NC_017986.1.

    Genome annotation databases

    EnsemblBacteriaiAFK71535; AFK71535; YSA_08807.
    GeneIDi12988172.
    KEGGippi:YSA_08807.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003588 Genomic DNA. Translation: AFK71535.1 .
    RefSeqi YP_006388650.1. NC_017986.1.

    3D structure databases

    ProteinModelPortali I3V1B4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFK71535 ; AFK71535 ; YSA_08807 .
    GeneIDi 12988172.
    KEGGi ppi:YSA_08807.

    Phylogenomic databases

    KOi K01601.

    Enzyme and pathway databases

    BioCyci PPUT231023:GLIT-4838-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Naphthalene-Degrading Pseudomonas putida Strain ND6."
      Li S., Zhao H., Li Y., Niu S., Cai B.
      J. Bacteriol. 194:5154-5155(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ND6Imported.

    Entry informationi

    Entry nameiI3V1B4_PSEPU
    AccessioniPrimary (citable) accession number: I3V1B4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3