Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I3V1B4 (I3V1B4_PSEPU) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:YSA_08807 EMBL AFK71535.1
OrganismPseudomonas putida ND6 [Complete proteome] EMBL AFK71535.1
Taxonomic identifier231023 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3V1B4 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 4D2F8ACA673EA2ED

FASTA42546,135
        10         20         30         40         50         60 
MVDHKAGREE FTARFFVESS YPIERVSEVI AGEQSSGTFL SLPGESAELK ERSRARVVAI 

        70         80         90        100        110        120 
EPLPSVSSPS LHSDYLARHN PSETYHRGEV TIAFPTANIG TNIPALLTTI AGNLFEIGEV 

       130        140        150        160        170        180 
SGLRVLDLEL PERFASGFIG PQFGIEGTRA LAGVHDRPII GTIVKPSIGL TPEQTASVVD 

       190        200        210        220        230        240 
ELCAGGIDFI KDDELLIDPT YASFDARLGA VMPVLHKHAD RLGRMPMYAI NISGSIDEMM 

       250        260        270        280        290        300 
RRQDAVLEAG GTCVMLCLNW VGHSAVEHIR KHAQLPIHGH RNGWGALTRY PQLGFSFEVY 

       310        320        330        340        350        360 
QKIWRLAGID HLHVNGIQGK FYEADDSVIS SAKSCLAPFA GMRPLMPVFS SGQWAGQAPE 

       370        380        390        400        410        420 
LFNRLQSVDL MHLAGGGIIG HPMGIEAGVQ SMREGWEAAV QHVPLERYAE GRPALSAALQ 


KFGGN 

« Hide

References

[1]"Complete Genome Sequence of the Naphthalene-Degrading Pseudomonas putida Strain ND6."
Li S., Zhao H., Li Y., Niu S., Cai B.
J. Bacteriol. 194:5154-5155(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ND6 EMBL AFK71535.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003588 Genomic DNA. Translation: AFK71535.1.
RefSeqYP_006388650.1. NC_017986.1.

3D structure databases

ProteinModelPortalI3V1B4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK71535; AFK71535; YSA_08807.
GeneID12988172.
KEGGppi:YSA_08807.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycPPUT231023:GLIT-4838-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3V1B4_PSEPU
AccessionPrimary (citable) accession number: I3V1B4
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)