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I3UPT4 (I3UPT4_PSEPU) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:YSA_01357 EMBL AFK67505.1
OrganismPseudomonas putida ND6 [Complete proteome] EMBL AFK67505.1
Taxonomic identifier231023 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length570 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFK67505.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I3UPT4 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 28E9553ACB640B2A

FASTA57062,173
        10         20         30         40         50         60 
MSGANIVGPM LQLQKQETRS PMMRDYAEAA RTFDHDQAVV AALHGNLEAL NACVECCDRH 

        70         80         90        100        110        120 
AGDGKLALIH EDRDGNSARY SFDQLQVQAA RFANVLKAQG VGAGDRVAGL MPRTPELLVT 

       130        140        150        160        170        180 
ILATWRLGAV YQPLFTAFGP KAIEHRLEQS HARVIVTDSH NRAKLDDVHA CPTIITVKAR 

       190        200        210        220        230        240 
SGELDFQQCL ERAADVCEPV MRSGNDPFLL MFTSGTTGPA KPLEVPLRAI VAFQGYMRDA 

       250        260        270        280        290        300 
IELLPEDNFW NLADPGWAYG LYYAVTGPLS LGHATTFYDG PFSVESCARV IDKLGITNLA 

       310        320        330        340        350        360 
GSPTAYRLLI AAGKDFSAPI KGRLRVVSSA GEPLNPEVIR WFADELGVTI HDHYGQTELG 

       370        380        390        400        410        420 
MVLCNHHGLK HPVHLGSAGY AIPGHRIVVL DEQGNERPAG QPGILAVDRE QSPLCWFGGY 

       430        440        450        460        470        480 
HGLPTKAFVG KYYLSGDTVE LNPDGSISFV GRSDDVITTS GYRVGPFDVE SALIEHPAVI 

       490        500        510        520        530        540 
EAAVIGKPDP ERTELIKAFV VLASGYAGSV ELEETLRQHV RQRLYAHAYP REIEFVSELP 

       550        560        570 
KTPSGKLQRF ILRNQEVAKQ QAQQATPVSV 

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References

[1]"Complete Genome Sequence of the Naphthalene-Degrading Pseudomonas putida Strain ND6."
Li S., Zhao H., Li Y., Niu S., Cai B.
J. Bacteriol. 194:5154-5155(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ND6 EMBL AFK67505.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003588 Genomic DNA. Translation: AFK67505.1.
RefSeqYP_006384620.1. NC_017986.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK67505; AFK67505; YSA_01357.
GeneID12992895.
KEGGppi:YSA_01357.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01895.

Enzyme and pathway databases

BioCycPPUT231023:GLIT-730-MONOMER.

Family and domain databases

InterProIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3UPT4_PSEPU
AccessionPrimary (citable) accession number: I3UPT4
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: January 22, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)