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I3UF79 (I3UF79_ADVKW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length847 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3UF79 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 05E95C6DDBE762B8

FASTA84793,948
        10         20         30         40         50         60 
MSLADYQRKR RFDRTPEPQE DAIGGGRPIF VVQLHHASHR HYDFRLQVAG VLKSWAVPKG 

        70         80         90        100        110        120 
PSLDPSVKRL AVQVEDHPVS YARFEGDIPK GEYGGGHVRI FDSGIWSTNE EVEAQLAKGH 

       130        140        150        160        170        180 
LKFELFGDIL QGGWHLIRSH RRSRQQQWLL IKQDDAFAGD KEADDFVDES AALVTDGKGP 

       190        200        210        220        230        240 
AAKKASAGKK TAAQKRAKDR AAKNITSKGT TSKAVADTKS QKNPATAAWR AQLDAFKGAK 

       250        260        270        280        290        300 
RQPLQHKPFA PQLCLTADKA PVGDDWLHEV KWDGYRLLCT IVDGTPALWS RNGLDWTARL 

       310        320        330        340        350        360 
PDVASDMASL GLQQAAFDGE LVVLEGVHSN FSALQATLSG EKQAPLSYLL FDLIHLQGFD 

       370        380        390        400        410        420 
LCDVPLQERK ALLETVLQGA PSRLRYSSHL VGSGPQVFAR VTAEKLEGII SKRVNASYHA 

       430        440        450        460        470        480 
GRSRSWQKIK MELSDEFAIA GFIEPKGSRM GIGSLLLALP EGKSGWRLAG RVGTGMNDAM 

       490        500        510        520        530        540 
LRQLSTLLRP VAETDPTVTV AGIDSDLRRA KWVKPRHVVE VFYRGHSSQG LLRHTAFKTL 

       550        560        570        580        590        600 
REDKSVADLR GSQAKEEPMK KDTVQISSPD RLVYPEMQVS KQDVADYYER VMDWLLPGVA 

       610        620        630        640        650        660 
GRPLSVLRCP DGTQKACFFQ KHHTAGMDVS TVSLQEEQGG RQDYLMVRDK TDVMQLVQFN 

       670        680        690        700        710        720 
SLEFHPWGAL ADSPDDCDRL VFDLDPSEQV SWATVKKAAR QVRDLLEQLQ LQSFVRTTGG 

       730        740        750        760        770        780 
KGLHVVAPLK PPVPWEDARQ FARAFAESLA GAHPDTYIAT ASKKQRKGLI FVDYLRNGRG 

       790        800        810        820        830        840 
ATSVCSYSLR ARPGAAVATP LRWEELGRVK SSDAFHIRNL PQRLARLASD PWEEMTAIRQ 


SLPDLPE 

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References

[1]"Whole-genome shotgun sequencing of the sulfur-oxidizing chemoautotroph Tetrathiobacter kashmirensis."
Ghosh W., George A., Agarwal A., Raj P., Alam M., Pyne P., Das Gupta S.K.
J. Bacteriol. 193:5553-5554(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17095 / LMG 22695 / WT001.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003555 Genomic DNA. Translation: AFK63667.1.
RefSeqYP_006380649.1. NC_017964.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK63667; AFK63667; TKWG_19270.
GeneID12996549.
KEGGaka:TKWG_19270.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycAKAS1036672:GL7X-2969-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3UF79_ADVKW
AccessionPrimary (citable) accession number: I3UF79
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 16, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)