I3UDT6 (I3UDT6_9BURK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisophosphate carboxylase EMBL AFK63174.1
EC=4.1.1.39 EMBL AFK63174.1

Gene names

Name:	rbcL EMBL AFK63174.1
ORF Names:	TKWG_16015 EMBL AFK63174.1

Organism

Advenella kashmirensis WT001 EMBL AFK63174.1

Taxonomic identifier

1036672 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Advenella › Advenella kashmirensis

Protein attributes

Sequence length	414 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL AFK63174.1
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I3UDT6 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: 78F53CC3106FCBAD	FASTA	414	45,829
	10 20 30 40 50 60 MDRQADRLRQ VPRQGIQVDP VPNNEGQYFC YIAYDLSLFE EGSITNVTAS IIGNVFSFKP 70 80 90 100 110 120 LKAARLEDMR FPAAYVKTFA GPPTGIIVER ERLDKFGRPL LGATTKPKLG LSGRNYGRVV 130 140 150 160 170 180 YEGLKGGLDF MKDDENINSQ PFMHWRDRFL FVMDAVNKAS AATGEVKGSY LNITAGTMEE 190 200 210 220 230 240 MYRRAEFAKE LGSVIVMVDL VVGWTAIQSI SHWCRQNDMI LHMHRAGHGT YTRQKNHGVS 250 260 270 280 290 300 FRVIAKWLRL AGVDHVHAGT AVGKLEGDPM TVQGYYNVCR QSYTQTDLPR GIFFDQDWVA 310 320 330 340 350 360 LRKVLPVASG GIHAGQMHQL LDLFGDDVIL QFGGGTIGHP DGIQAGAVAN RVALESMVLA 370 380 390 400 410 RNEGRNIAEE GPQILKDAAK HCGPLRAALD TWGEVTFNYQ STDTSDYTPM PSVA

References

[1]	"Whole-genome shotgun sequencing of the sulfur-oxidizing chemoautotroph Tetrathiobacter kashmirensis." Ghosh W., George A., Agarwal A., Raj P., Alam M., Pyne P., Das Gupta S.K. J. Bacteriol. 193:5553-5554(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: WT001 EMBL AFK63174.1.
[2]	"Whole genome sequence of Advenella kashmirensis and comparative genomics of non-pathogenic and pathogenic members of Alcaligenaceae." Alam M., Pyne P., Roy C., Ali A., Mandal A., Chakraborty S., Ghosh W. Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: WT001 EMBL AFK63174.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003555 Genomic DNA. Translation: AFK63174.1.
RefSeq	YP_006380156.1. NC_017964.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFK63174; AFK63174; TKWG_16015.
GeneID	12996167.
KEGG	aka:TKWG_16015.
Phylogenomic databases
KO	K01601.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I3UDT6_9BURK

Accession

Primary (citable) accession number: I3UDT6

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	May 1, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)