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Protein
Submitted name:

Ribulose bisophosphate carboxylase

Gene

rbcL

Organism
Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) (Tetrathiobacter kashmirensis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciAKAS1036672:GL7X-2463-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisophosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Name:rbcLImported
Ordered Locus Names:TKWG_16015Imported
OrganismiAdvenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) (Tetrathiobacter kashmirensis)Imported
Taxonomic identifieri1036672 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceae
ProteomesiUP000005267: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI3UDT6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3UDT6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDRQADRLRQ VPRQGIQVDP VPNNEGQYFC YIAYDLSLFE EGSITNVTAS
60 70 80 90 100
IIGNVFSFKP LKAARLEDMR FPAAYVKTFA GPPTGIIVER ERLDKFGRPL
110 120 130 140 150
LGATTKPKLG LSGRNYGRVV YEGLKGGLDF MKDDENINSQ PFMHWRDRFL
160 170 180 190 200
FVMDAVNKAS AATGEVKGSY LNITAGTMEE MYRRAEFAKE LGSVIVMVDL
210 220 230 240 250
VVGWTAIQSI SHWCRQNDMI LHMHRAGHGT YTRQKNHGVS FRVIAKWLRL
260 270 280 290 300
AGVDHVHAGT AVGKLEGDPM TVQGYYNVCR QSYTQTDLPR GIFFDQDWVA
310 320 330 340 350
LRKVLPVASG GIHAGQMHQL LDLFGDDVIL QFGGGTIGHP DGIQAGAVAN
360 370 380 390 400
RVALESMVLA RNEGRNIAEE GPQILKDAAK HCGPLRAALD TWGEVTFNYQ
410
STDTSDYTPM PSVA
Length:414
Mass (Da):45,829
Last modified:September 5, 2012 - v1
Checksum:i78F53CC3106FCBAD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003555 Genomic DNA. Translation: AFK63174.1.
RefSeqiWP_014751265.1. NC_017964.1.
YP_006380156.1. NC_017964.1.

Genome annotation databases

EnsemblBacteriaiAFK63174; AFK63174; TKWG_16015.
GeneIDi12996167.
KEGGiaka:TKWG_16015.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003555 Genomic DNA. Translation: AFK63174.1.
RefSeqiWP_014751265.1. NC_017964.1.
YP_006380156.1. NC_017964.1.

3D structure databases

ProteinModelPortaliI3UDT6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFK63174; AFK63174; TKWG_16015.
GeneIDi12996167.
KEGGiaka:TKWG_16015.

Phylogenomic databases

KOiK01601.

Enzyme and pathway databases

BioCyciAKAS1036672:GL7X-2463-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole-genome shotgun sequencing of the sulfur-oxidizing chemoautotroph Tetrathiobacter kashmirensis."
    Ghosh W., George A., Agarwal A., Raj P., Alam M., Pyne P., Das Gupta S.K.
    J. Bacteriol. 193:5553-5554(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17095 / LMG 22695 / WT001Imported.

Entry informationi

Entry nameiI3UDT6_ADVKW
AccessioniPrimary (citable) accession number: I3UDT6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: February 4, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.