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I3UDM0 (I3UDM0_ADVKW) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site541Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2791Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1491Substrate By similarity HAMAP-Rule MF_01201
Binding site3271Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue541N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
I3UDM0 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 1237AE1D8C228F1D

FASTA39141,868
        10         20         30         40         50         60 
MPRPIRAVIS QQAMSHNLSV IRQYLDNARQ APVTAADGAQ PAPMGATHIW AVIKANAYGH 

        70         80         90        100        110        120 
GLETAIGGFA QADGLAMLDL QETERAREAG WQGPLLMLEG FFETRDLPLL QKNRVVSTIH 

       130        140        150        160        170        180 
HPEQIRMLQA STLAGPLDVF LKINTGMNRL GFAPQQFDQA HQDLLALQQQ GKVGRIGFMT 

       190        200        210        220        230        240 
HFADADGAQG AVDVPATVFR DTVGQCQGSI SLCNSAAVLR YPQLAVSAAD NWVRPGICLY 

       250        260        270        280        290        300 
GSSPFANTTG EEFGLRQTMT LQARLLSIQQ VKQGQSVGYG STYTATRDMR IGVVACGYAD 

       310        320        330        340        350        360 
GYPRSAPSGT PAWVNGVATE LAGRVSMDML TVDLDPIPDA AVGDWVTLWG NNGPHIDEVA 

       370        380        390 
AAAGTIAYEL LCALAQRVPV HVQYSGESVE K 

« Hide

References

[1]"Whole-genome shotgun sequencing of the sulfur-oxidizing chemoautotroph Tetrathiobacter kashmirensis."
Ghosh W., George A., Agarwal A., Raj P., Alam M., Pyne P., Das Gupta S.K.
J. Bacteriol. 193:5553-5554(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17095 / LMG 22695 / WT001.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003555 Genomic DNA. Translation: AFK63108.1.
RefSeqYP_006380090.1. NC_017964.1.

3D structure databases

ProteinModelPortalI3UDM0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK63108; AFK63108; TKWG_15575.
GeneID12997861.
KEGGaka:TKWG_15575.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycAKAS1036672:GL7X-2396-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3UDM0_ADVKW
AccessionPrimary (citable) accession number: I3UDM0
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: February 19, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)