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I3TMB5

- I3TMB5_TISMK

UniProt

I3TMB5 - I3TMB5_TISMK

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

TMO_2065

Organism
Tistrella mobilis (strain KA081020-065)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTMOB1110502:GLMJ-2090-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:TMO_2065Imported
OrganismiTistrella mobilis (strain KA081020-065)Imported
Taxonomic identifieri1110502 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeTistrella
ProteomesiUP000005258: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiKSASTHN.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3TMB5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRRFADLLDR LILTPSRTTK LRLIGDYFAH TPDPDRGWAL AALAGTLDLR
60 70 80 90 100
AARPSAIREL IGSRTDPVLF ALSYDYVGDL AETAALMWPE PAATGAGRND
110 120 130 140 150
PGVRLSEVAE TLAAAPSAAA AMRSLAGWLD GLDTTGRWAL LKLATGGLRV
160 170 180 190 200
GVSAGLAKAA FAAWAKLAPE AVEEVWHGLE PPYEALFAWA TGTGPRPDPR
210 220 230 240 250
GLPHFRSFML ATPAELADLA PLDPSDFRAE WKWDGIRAQM VAAGGEIRLY
260 270 280 290 300
ARSGDEIGRG FPDLLDAWPF GEAAVDGELV VMGPNDQPAP FAELQKRINR
310 320 330 340 350
RTVGAGLLKS LPAHLRLYDL LAKGGVDLRP RPFTERRAAL EALVAAHPSP
360 370 380 390 400
RFDLSPLVAF SSWAELDRLR ADPPAATIEG VMLKRRDTPY LAGRPKGPWF
410 420 430 440 450
KWKRAPLTLD VVLMYAQRGH GRRSSYFSDY TFGVWRDDDT LVPVGKAYSG
460 470 480 490 500
FTDQELVELD RWIRRNTTER FGPVRAVAPG LVLEVAFDSV QPSPRHKSGL
510 520 530
ALRFPRIARI RWDKPAAEAD RLETAAGLVA GSPAASVT
Length:538
Mass (Da):58,625
Last modified:September 5, 2012 - v1
Checksum:iD50C446AF476BDF8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003236 Genomic DNA. Translation: AFK53903.1.
RefSeqiWP_014745581.1. NC_017956.1.
YP_006371487.1. NC_017956.1.

Genome annotation databases

EnsemblBacteriaiAFK53903; AFK53903; TMO_2065.
GeneIDi13005185.
KEGGitmo:TMO_2065.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003236 Genomic DNA. Translation: AFK53903.1 .
RefSeqi WP_014745581.1. NC_017956.1.
YP_006371487.1. NC_017956.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFK53903 ; AFK53903 ; TMO_2065 .
GeneIDi 13005185.
KEGGi tmo:TMO_2065.

Phylogenomic databases

KOi K01971.
OMAi KSASTHN.

Enzyme and pathway databases

BioCyci TMOB1110502:GLMJ-2090-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KA081020-065Imported.

Entry informationi

Entry nameiI3TMB5_TISMK
AccessioniPrimary (citable) accession number: I3TMB5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 1, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3