Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I3TMB5 (I3TMB5_TISMK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:TMO_2065 EMBL AFK53903.1
OrganismTistrella mobilis (strain KA081020-065) [Complete proteome] [HAMAP] EMBL AFK53903.1
Taxonomic identifier1110502 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeTistrella

Protein attributes

Sequence length538 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I3TMB5 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: D50C446AF476BDF8

FASTA53858,625
        10         20         30         40         50         60 
MRRFADLLDR LILTPSRTTK LRLIGDYFAH TPDPDRGWAL AALAGTLDLR AARPSAIREL 

        70         80         90        100        110        120 
IGSRTDPVLF ALSYDYVGDL AETAALMWPE PAATGAGRND PGVRLSEVAE TLAAAPSAAA 

       130        140        150        160        170        180 
AMRSLAGWLD GLDTTGRWAL LKLATGGLRV GVSAGLAKAA FAAWAKLAPE AVEEVWHGLE 

       190        200        210        220        230        240 
PPYEALFAWA TGTGPRPDPR GLPHFRSFML ATPAELADLA PLDPSDFRAE WKWDGIRAQM 

       250        260        270        280        290        300 
VAAGGEIRLY ARSGDEIGRG FPDLLDAWPF GEAAVDGELV VMGPNDQPAP FAELQKRINR 

       310        320        330        340        350        360 
RTVGAGLLKS LPAHLRLYDL LAKGGVDLRP RPFTERRAAL EALVAAHPSP RFDLSPLVAF 

       370        380        390        400        410        420 
SSWAELDRLR ADPPAATIEG VMLKRRDTPY LAGRPKGPWF KWKRAPLTLD VVLMYAQRGH 

       430        440        450        460        470        480 
GRRSSYFSDY TFGVWRDDDT LVPVGKAYSG FTDQELVELD RWIRRNTTER FGPVRAVAPG 

       490        500        510        520        530 
LVLEVAFDSV QPSPRHKSGL ALRFPRIARI RWDKPAAEAD RLETAAGLVA GSPAASVT 

« Hide

References

[1]"Bacterial biosynthesis and maturation of the didemnin anti-cancer agents."
Xu Y., Kersten R.D., Nam S.J., Lu L., Al-Suwailem A.M., Zheng H., Fenical W., Dorrestein P.C., Moore B.S., Qian P.Y.
J. Am. Chem. Soc. 134:8625-8632(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KA081020-065 EMBL AFK53903.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003236 Genomic DNA. Translation: AFK53903.1.
RefSeqYP_006371487.1. NC_017956.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK53903; AFK53903; TMO_2065.
GeneID13005185.
KEGGtmo:TMO_2065.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGQPYPFF.

Enzyme and pathway databases

BioCycTMOB1110502:GLMJ-2090-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3TMB5_TISMK
AccessionPrimary (citable) accession number: I3TMB5
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)