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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Py04_0695

Organism
Pyrococcus sp. ST04
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPSP1183377:GLJ2-712-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
ORF Names:Py04_0695Imported
OrganismiPyrococcus sp. ST04Imported
Taxonomic identifieri1183377 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000006467 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI3RDI7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I3RDI7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYPKIIVKP PGPKARELIE RERKVLSPGI GVKLFPLVPK RGFGPFIEDV
60 70 80 90 100
DGNVFIDFLA GAAAASTGYS HPKLVEEVKK QVELIQHSMI GYTHNERAIR
110 120 130 140 150
VAEKLAKISP IENPKIVFGL SGSDAVDMAI KISKFSKRRP WILSFIGAYH
160 170 180 190 200
GQTFGATSVA SFQVSQKRGY SPLMPNVFWL PYPNPYRNIW GINGYEEPDE
210 220 230 240 250
LISRFLDYLE NYVFAHVVPP DEVAALFVEP IQGDAGIVVP PDNFFKELKP
260 270 280 290 300
ILEEYEILLV VDEVQTGIGR TGKWWGIEWF NVQPDLLIFG KGVASGMGLS
310 320 330 340 350
GVIGKEELMN MTSGSALLTP AANPVISAAA EATLEIIDNE NLIENALNVG
360 370 380 390 400
NFIMKRLEEM KEEFEIIGDV RGKGLMIGVE IVKDKNKPDP EMTGKICWRA
410 420 430 440 450
FELGLILPSY GMFGNVIRIT PPLVITREVA ERALEIIEQA MKDAIAGKVE

RKVVTWH
Length:457
Mass (Da):50,774
Last modified:September 5, 2012 - v1
Checksum:i7FCAB4DB26D6726E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003534 Genomic DNA. Translation: AFK22297.1.
RefSeqiWP_014733823.1. NC_017946.1.
YP_006354372.1. NC_017946.1.

Genome annotation databases

EnsemblBacteriaiAFK22297; AFK22297; Py04_0695.
GeneIDi13021932.
KEGGipys:Py04_0695.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003534 Genomic DNA. Translation: AFK22297.1.
RefSeqiWP_014733823.1. NC_017946.1.
YP_006354372.1. NC_017946.1.

3D structure databases

ProteinModelPortaliI3RDI7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFK22297; AFK22297; Py04_0695.
GeneIDi13021932.
KEGGipys:Py04_0695.

Phylogenomic databases

KOiK00823.

Enzyme and pathway databases

BioCyciPSP1183377:GLJ2-712-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Hyperthermophilic Archaeon Pyrococcus sp. Strain ST04, Isolated from a Deep-Sea Hydrothermal Sulfide Chimney on the Juan de Fuca Ridge."
    Jung J.H., Lee J.H., Holden J.F., Seo D.H., Shin H., Kim H.Y., Kim W., Ryu S., Park C.S.
    J. Bacteriol. 194:4434-4435(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ST04Imported.

Entry informationi

Entry nameiI3RDI7_9EURY
AccessioniPrimary (citable) accession number: I3RDI7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: April 1, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.