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I3RD38

- I3RD38_9EURY

UniProt

I3RD38 - I3RD38_9EURY

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Protein
Submitted name: Putative ATP dependent DNA ligase
Gene
Py04_0546
Organism
Pyrococcus sp. ST04
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSP1183377:GLJ2-557-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP dependent DNA ligaseImported
Gene namesi
ORF Names:Py04_0546Imported
OrganismiPyrococcus sp. ST04Imported
Taxonomic identifieri1183377 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000006467: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK07468.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

I3RD38-1 [UniParc]FASTAAdd to Basket

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MVSSRFKDIL TSLGISEERI EILEAKGGIV EDEYEGLRYL RFKDSAGKLR    50
RGTVVFDFDK IILGFPHIKR VVNLEKGIRR IFKRGEFYVE EKVDGYNVRV 100
TKVGERILAI TRGGFICPFT TERITDFVPE EFFKDNPNLV LVGEMAGPES 150
PYLVEGPPYV KEDIKFFLFD VQEINTGKSL PVEERLKLAE EYGIPHVEVF 200
GKYTRDDIGE LYALIEKLSE EGREGIVMKS PDMKKIVKYV TPYANINDIK 250
IGARVFYELP PGYFTSRISR LAFYIAERKI RDEELRKLAE DLGKALLQPF 300
VEGILDVEQG EEIAETFKIR VKKIETAYKM VTHFEKLGLN IEIVDIEEMD 350
GLWRITFKRV YSDATEKIKE LVGGKAFVD 379
Length:379
Mass (Da):43,629
Last modified:September 5, 2012 - v1
Checksum:iDECA9C592BA15526
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003534 Genomic DNA. Translation: AFK22148.1.
RefSeqiWP_014733674.1. NC_017946.1.
YP_006354223.1. NC_017946.1.

Genome annotation databases

EnsemblBacteriaiAFK22148; AFK22148; Py04_0546.
GeneIDi13021777.
KEGGipys:Py04_0546.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003534 Genomic DNA. Translation: AFK22148.1 .
RefSeqi WP_014733674.1. NC_017946.1.
YP_006354223.1. NC_017946.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFK22148 ; AFK22148 ; Py04_0546 .
GeneIDi 13021777.
KEGGi pys:Py04_0546.

Phylogenomic databases

KOi K07468.

Enzyme and pathway databases

BioCyci PSP1183377:GLJ2-557-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Hyperthermophilic Archaeon Pyrococcus sp. Strain ST04, Isolated from a Deep-Sea Hydrothermal Sulfide Chimney on the Juan de Fuca Ridge."
    Jung J.H., Lee J.H., Holden J.F., Seo D.H., Shin H., Kim H.Y., Kim W., Ryu S., Park C.S.
    J. Bacteriol. 194:4434-4435(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ST04Imported.

Entry informationi

Entry nameiI3RD38_9EURY
AccessioniPrimary (citable) accession number: I3RD38
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: September 3, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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