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I3RD38

- I3RD38_9EURY

UniProt

I3RD38 - I3RD38_9EURY

Protein
Submitted name:

Putative ATP dependent DNA ligase

Gene

Py04_0546

Organism
Pyrococcus sp. ST04
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (05 Sep 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSP1183377:GLJ2-557-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP dependent DNA ligaseImported
    Gene namesi
    ORF Names:Py04_0546Imported
    OrganismiPyrococcus sp. ST04Imported
    Taxonomic identifieri1183377 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
    ProteomesiUP000006467: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK07468.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I3RD38-1 [UniParc]FASTAAdd to Basket

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    MVSSRFKDIL TSLGISEERI EILEAKGGIV EDEYEGLRYL RFKDSAGKLR    50
    RGTVVFDFDK IILGFPHIKR VVNLEKGIRR IFKRGEFYVE EKVDGYNVRV 100
    TKVGERILAI TRGGFICPFT TERITDFVPE EFFKDNPNLV LVGEMAGPES 150
    PYLVEGPPYV KEDIKFFLFD VQEINTGKSL PVEERLKLAE EYGIPHVEVF 200
    GKYTRDDIGE LYALIEKLSE EGREGIVMKS PDMKKIVKYV TPYANINDIK 250
    IGARVFYELP PGYFTSRISR LAFYIAERKI RDEELRKLAE DLGKALLQPF 300
    VEGILDVEQG EEIAETFKIR VKKIETAYKM VTHFEKLGLN IEIVDIEEMD 350
    GLWRITFKRV YSDATEKIKE LVGGKAFVD 379
    Length:379
    Mass (Da):43,629
    Last modified:September 5, 2012 - v1
    Checksum:iDECA9C592BA15526
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003534 Genomic DNA. Translation: AFK22148.1.
    RefSeqiWP_014733674.1. NC_017946.1.
    YP_006354223.1. NC_017946.1.

    Genome annotation databases

    EnsemblBacteriaiAFK22148; AFK22148; Py04_0546.
    GeneIDi13021777.
    KEGGipys:Py04_0546.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003534 Genomic DNA. Translation: AFK22148.1 .
    RefSeqi WP_014733674.1. NC_017946.1.
    YP_006354223.1. NC_017946.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFK22148 ; AFK22148 ; Py04_0546 .
    GeneIDi 13021777.
    KEGGi pys:Py04_0546.

    Phylogenomic databases

    KOi K07468.

    Enzyme and pathway databases

    BioCyci PSP1183377:GLJ2-557-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Hyperthermophilic Archaeon Pyrococcus sp. Strain ST04, Isolated from a Deep-Sea Hydrothermal Sulfide Chimney on the Juan de Fuca Ridge."
      Jung J.H., Lee J.H., Holden J.F., Seo D.H., Shin H., Kim H.Y., Kim W., Ryu S., Park C.S.
      J. Bacteriol. 194:4434-4435(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ST04Imported.

    Entry informationi

    Entry nameiI3RD38_9EURY
    AccessioniPrimary (citable) accession number: I3RD38
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2012
    Last sequence update: September 5, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3