I3RD38 (I3RD38_9EURY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative ATP dependent DNA ligase EMBL AFK22148.1

Gene names

ORF Names:

Py04_0546 EMBL AFK22148.1

Organism

Pyrococcus sp. ST04 EMBL AFK22148.1

Taxonomic identifier

1183377 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	379 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFK22148.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I3RD38 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: DECA9C592BA15526	FASTA	379	43,629
	10 20 30 40 50 60 MVSSRFKDIL TSLGISEERI EILEAKGGIV EDEYEGLRYL RFKDSAGKLR RGTVVFDFDK 70 80 90 100 110 120 IILGFPHIKR VVNLEKGIRR IFKRGEFYVE EKVDGYNVRV TKVGERILAI TRGGFICPFT 130 140 150 160 170 180 TERITDFVPE EFFKDNPNLV LVGEMAGPES PYLVEGPPYV KEDIKFFLFD VQEINTGKSL 190 200 210 220 230 240 PVEERLKLAE EYGIPHVEVF GKYTRDDIGE LYALIEKLSE EGREGIVMKS PDMKKIVKYV 250 260 270 280 290 300 TPYANINDIK IGARVFYELP PGYFTSRISR LAFYIAERKI RDEELRKLAE DLGKALLQPF 310 320 330 340 350 360 VEGILDVEQG EEIAETFKIR VKKIETAYKM VTHFEKLGLN IEIVDIEEMD GLWRITFKRV 370 YSDATEKIKE LVGGKAFVD

References

[1]	"Complete Genome Sequence of the Hyperthermophilic Archaeon Pyrococcus sp. Strain ST04, Isolated from a Deep-Sea Hydrothermal Sulfide Chimney on the Juan de Fuca Ridge." Jung J.H., Lee J.H., Holden J.F., Seo D.H., Shin H., Kim H.Y., Kim W., Ryu S., Park C.S. J. Bacteriol. 194:4434-4435(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ST04 EMBL AFK22148.1.
[2]	Jung J.-H., Lee J.-H., Holden J.F., Seo D.-H., Shin H., Kim W., Ryu S., Park C.-S. Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ST04 EMBL AFK22148.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003534 Genomic DNA. Translation: AFK22148.1.
RefSeq	YP_006354223.1. NC_017946.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFK22148; AFK22148; Py04_0546.
GeneID	13021777.
KEGG	pys:Py04_0546.
Phylogenomic databases
KO	K07468.
Enzyme and pathway databases
BioCyc	PSP1183377:GLJ2-557-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

I3RD38_9EURY

Accession

Primary (citable) accession number: I3RD38

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	May 29, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)