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Protein

Superoxide dismutase

Gene

sodA

Organism
Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi28Divalent metal cationUniRule annotation1
Metal bindingi76Divalent metal cationUniRule annotation1
Metal bindingi158Divalent metal cationUniRule annotation1
Metal bindingi162Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciHMED523841:G1HBL-3813-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:HFX_6409Imported
ORF Names:C439_17593Imported
Encoded oniPlasmid pHM500Imported
OrganismiHaloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei)Imported
Taxonomic identifieri523841 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHaloferacalesHaloferacaceaeHaloferax
Proteomesi
  • UP000011603 Componenti: Unassembled WGS sequence
  • UP000006469 Componenti: Plasmid pHM500

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 84Sod_Fe_NInterPro annotationAdd BLAST81
Domaini91 – 187Sod_Fe_CInterPro annotationAdd BLAST97

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564
OMAiKWGSFDK
OrthoDBiPOG093Z0AKF

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

I3RBB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDYELDPLP YEYDALEPHI SEQVLTWHHD THHQGYVNGW NAAEETLEAN
60 70 80 90 100
REAGEFDSSA GAIRNVTHNG CGHILHDLFW QNMSPEGGDE PTGALADRIA
110 120 130 140 150
EDFGSYEAWK GEFEAAAGAA GGWALLVYDS FSNQLRNVVV DKHDQGALWG
160 170 180 190 200
SHPILALDVW EHSYYHDYGP ARGDFISAFF EVVDWDVPAA RYEQALERFE
Length:200
Mass (Da):22,485
Last modified:September 5, 2012 - v1
Checksum:i44DF49E9F814A0CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001871 Genomic DNA Translation: AFK21528.1
AOLO01000015 Genomic DNA Translation: ELZ97159.1
RefSeqiWP_004060713.1, NZ_AOLO01000015.1

Genome annotation databases

EnsemblBacteriaiAFK21528; AFK21528; HFX_6409
ELZ97159; ELZ97159; C439_17593
GeneIDi13025654
KEGGihme:HFX_6409
PATRICifig|523841.21.peg.3538

Similar proteinsi

Entry informationi

Entry nameiI3RBB8_HALMT
AccessioniPrimary (citable) accession number: I3RBB8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: March 28, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

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