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I3RA20 (I3RA20_HALMT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL AFK21080.1
   Technical termComplete proteome
Plasmid EMBL AFK21080.1
Gene Ontology (GO)
   Molecular_functionphosphodiesterase I activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I3RA20 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 03F2B673642481FF

FASTA54060,067
        10         20         30         40         50         60 
MDVENPPSPD PNAHSRRRFL QRTGGATALA VLGASGQAAA VDEHGRFKAD PFSLGVASGD 

        70         80         90        100        110        120 
PLPDSVILWT RLAPSPLTRG GGMPDKRVPV QWTVAESEDM TPVVQTGNVF ADPAHAHSVH 

       130        140        150        160        170        180 
VNVQNLDPNT EYYYQFRTGG YRSPVGRTKT APEVGATPEE FRFGFASCQA WYDGFYTPYK 

       190        200        210        220        230        240 
HMAADELDLI VHLGDYIYEY GIGPNGGVRD TAVPQAYRSE PTTLDRYRLQ YGLYKSDADL 

       250        260        270        280        290        300 
QAAHASAPWL VTRDDHEVDN NWAGDVPQDP DKQTVEELLK RRAAAFKAYY EHMPFRLEQK 

       310        320        330        340        350        360 
PDGPDQKLYR NYTFGDLVEF NVLDTRLYRS DQACGDAFTV DACQKRFKEN RTILGDRQQA 

       370        380        390        400        410        420 
WLVNNLEASN ATWDVLANQV PFAKMDFLRG AADGYRMDQW DGYVADQVAV KNAFEASVNN 

       430        440        450        460        470        480 
PVVVTGDFHS NWANDIKSAQ NESKTIGTEF IGTSISSGGD GSEFSDINGN KEGVFGKHVV 

       490        500        510        520        530        540 
KENENVKYNN NRRGYTRCTL TPDEWVTEFQ VVDYVTEPGA PVRTDKRFVV EAGTPGLQEP 

« Hide

References

« Hide 'large scale' references
[1]"Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei."
Cai S., Cai L., Liu H., Liu X., Han J., Zhou J., Xiang H.
Appl. Environ. Microbiol. 78:1946-1952(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CGMCC 1.2087 EMBL AFK21080.1.
[2]"Complete Genome Sequence of the Metabolically Versatile Halophilic Archaeon Haloferax mediterranei, a Poly(3-Hydroxybutyrate-co-3-Hydroxyvalerate) Producer."
Han J., Zhang F., Hou J., Liu X., Li M., Liu H., Cai L., Zhang B., Chen Y., Zhou J., Hu S., Xiang H.
J. Bacteriol. 194:4463-4464(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4, CGMCC 1.2087 EMBL AFK21080.1 and pHM300 EMBL AFK21080.1.
[3]Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 33500 EMBL EMA05137.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001870 Genomic DNA. Translation: AFK21080.1.
AOLO01000001 Genomic DNA. Translation: EMA05137.1.
RefSeqYP_006351067.1. NC_017943.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK21080; AFK21080; HFX_5248.
EMA05137; EMA05137; C439_00020.
GeneID13025980.
KEGGhme:HFX_5248.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01113.
OMAWELADDA.

Enzyme and pathway databases

BioCycHMED523841:GLDU-3739-MONOMER.

Family and domain databases

Gene3D3.60.21.10. 1 hit.
InterProIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamPF09423. PhoD. 1 hit.
[Graphical view]
SUPFAMSSF56300. SSF56300. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3RA20_HALMT
AccessionPrimary (citable) accession number: I3RA20
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: July 9, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)