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I3R4Z7 (I3R4Z7_HALMT) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.5.3 EMBL AFK19307.1

sn-glycerol-3-phosphate dehydrogenase subunit C EMBL EMA04504.1
Gene names
Name:glpC EMBL AFK19307.1
Ordered Locus Names:HFX_1601 EMBL AFK19307.1
ORF Names:C439_02477 EMBL EMA04504.1
OrganismHaloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei) [Complete proteome] [HAMAP] EMBL AFK19307.1
Taxonomic identifier523841 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloferax

Protein attributes

Sequence length436 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionOxidoreductase EMBL AFK19307.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functioniron-sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I3R4Z7 [UniParc].

Last modified September 5, 2012. Version 1.
Checksum: 21F26BE34BFB64A3

FASTA43649,035
        10         20         30         40         50         60 
MSDAESPTNP NLNPGAQTDD FEAVEVFPES TDMDLRPGAD NCYKCTACDV SCPVAEVDDE 

        70         80         90        100        110        120 
FPGPKFQGPE QWRLKRKDDE PVDDSIMSCS NCMRCDDACP SGVPLSQMHN TARGEYVEKE 

       130        140        150        160        170        180 
MDKLSREYIR NRILANYGTL AQLGSMFPRL TNAMMGNSLV QMVNEKVLGI TSERDFPAFA 

       190        200        210        220        230        240 
TQTFREWWNE RGGPKVRSEE KRVAYFHGCY SNYNTPEVGK AMVRVFESFG YEVVVPKQRC 

       250        260        270        280        290        300 
SGTPMFANGM LEDAKRAAGI NVENFSGLLN EGYDVIASCT SCSMSLRQEY PELFDIDGIK 

       310        320        330        340        350        360 
DVSEHTYEAL EYLRIHENLE DELREVSVDD QSFAYHAPCH ARNQGLDRQS VELFRELDGV 

       370        380        390        400        410        420 
EIEDVGDSCS GISGTYGWKE EKYDKSMQIA ADMFDHMEHA QGDVGMTECP TCSMQMEHGT 

       430 
GYDIKHPLQL LEEALV 

« Hide

References

« Hide 'large scale' references
[1]"Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei."
Cai S., Cai L., Liu H., Liu X., Han J., Zhou J., Xiang H.
Appl. Environ. Microbiol. 78:1946-1952(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CGMCC 1.2087 EMBL AFK19307.1.
[2]"Complete genome sequence of the metabolically versatile halophilic archaeon Haloferax mediterranei, a poly(3-hydroxybutyrate-co-3-hydroxyvalerate) producer."
Han J., Zhang F., Hou J., Liu X., Li M., Liu H., Cai L., Zhang B., Chen Y., Zhou J., Hu S., Xiang H.
J. Bacteriol. 194:4463-4464(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4 and CGMCC 1.2087 EMBL AFK19307.1.
[3]Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 33500 EMBL EMA04504.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001868 Genomic DNA. Translation: AFK19307.1.
AOLO01000002 Genomic DNA. Translation: EMA04504.1.
RefSeqYP_006349294.1. NC_017941.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK19307; AFK19307; HFX_1601.
EMA04504; EMA04504; C439_02477.
GeneID13027762.
KEGGhme:HFX_1601.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00113.
OMACTIYRIH.

Enzyme and pathway databases

BioCycHMED523841:GLDU-1590-MONOMER.

Family and domain databases

InterProIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR004017. Cys_rich_dom.
IPR017753. G3P_DH_GlpC_su.
IPR009051. Helical_ferredxn.
[Graphical view]
PfamPF02754. CCG. 2 hits.
PF13183. Fer4_8. 1 hit.
[Graphical view]
SUPFAMSSF46548. SSF46548. 1 hit.
TIGRFAMsTIGR03379. glycerol3P_GlpC. 1 hit.
PROSITEPS00198. 4FE4S_FER_1. 2 hits.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI3R4Z7_HALMT
AccessionPrimary (citable) accession number: I3R4Z7
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: December 11, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)