I3R375 (I3R375_HALMT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisophosphate carboxylase EMBL EMA03454.1
EC=4.1.1.39 EMBL EMA03454.1

Submitted name:
Ribulose-bisphosphate carboxylase large chain EMBL AFK18685.1
EC=4.1.1.39 EMBL AFK18685.1

Gene names

Name:	rbcL EMBL AFK18685.1
Ordered Locus Names:	HFX_0967 EMBL AFK18685.1
ORF Names:	C439_05630 EMBL EMA03454.1

Organism

Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei) [Complete proteome] [HAMAP] EMBL AFK18685.1

Taxonomic identifier

523841 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Haloferax › Haloferax mediterranei

Protein attributes

Sequence length	429 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL AFK18685.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I3R375 [UniParc]. Last modified September 5, 2012. Version 1. Checksum: C183A31F88DEC184	FASTA	429	45,707
	10 20 30 40 50 60 MGITYEDFLD LEYEPTDEDL VCTFRIDPAT GMSMEAAASR VASESSNGTW AALQPGADFT 70 80 90 100 110 120 DMGATTFSIA ERSSAGSQTG SDDIDGGNIQ VAYPAGLFEP GNMPQVLSCI AGNIMGMKAV 130 140 150 160 170 180 DSIRLMDCEW PEPVVSSYPG PLYGSSVREE IFGVSDRPIT ATVPKPKVGL STAEHAQVGY 190 200 210 220 230 240 DAWVGGVDLL KDDENLTDQD FNPFADRLTE SLSLRDDAED ETGEKKSYLI NVTADTQTML 250 260 270 280 290 300 DRVDEVAAQG GEYVMVDIIT AGWASLQTVR ERTEKHGLAI HAHRAMHAAF DRMPTHGVSM 310 320 330 340 350 360 RVLAQISRLC GVDQLHTGTA GLGKLANEDT VGINDWLKGD LYGRNDVLPV ASGGLHPGLL 370 380 390 400 410 420 PDLLDATGTN TCIQLGGGIH GHPDGTRSGA IALRSAIDAY VEGKSITEAA EETPELAVAL DKWGTETPR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei." Cai S., Cai L., Liu H., Liu X., Han J., Zhou J., Xiang H. Appl. Environ. Microbiol. 78:1946-1952(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CGMCC 1.2087 EMBL AFK18685.1.
[2]	"Complete genome sequence of the metabolically versatile halophilic archaeon Haloferax mediterranei, a poly(3-hydroxybutyrate-co-3-hydroxyvalerate) producer." Han J., Zhang F., Hou J., Liu X., Li M., Liu H., Cai L., Zhang B., Chen Y., Zhou J., Hu S., Xiang H. J. Bacteriol. 194:4463-4464(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4 and CGMCC 1.2087 EMBL AFK18685.1.
[3]	Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T. Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 33500 EMBL EMA03454.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001868 Genomic DNA. Translation: AFK18685.1. AOLO01000006 Genomic DNA. Translation: EMA03454.1.
RefSeq	YP_006348672.1. NC_017941.1.
3D structure databases
ProteinModelPortal	I3R375.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFK18685; AFK18685; HFX_0967.
GeneID	13027133.
KEGG	hme:HFX_0967.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01601.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR017712. RuBisCO_III. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
TIGRFAMs	TIGR03326. rubisco_III. 1 hit.
ProtoNet	Search...

Entry information

Entry name

I3R375_HALMT

Accession

Primary (citable) accession number: I3R375

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2012
Last sequence update:	September 5, 2012
Last modified:	May 1, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)