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Protein
Submitted name:

Zinc finger protein, FOG family member 1

Gene

ZFPM1

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein, FOG family member 1Imported
Gene namesi
Name:ZFPM1Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000018113.

Family & Domainsi

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiI3N167.
OMAiDGALWCR.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR036236. Znf_C2H2_sf.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 6 hits.
SUPFAMiSSF57667. SSF57667. 4 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 3 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.

Sequencei

Sequence statusi: Complete.

I3N167-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RDCLVLLVQG KPAAGPPEPT CCHDPGRHCS EGCTQILLPS VPGETESRRA
60 70 80 90 100
GSGQQQAVRP RAGQGSGPSQ GSRQLQERVR CYPISRWKAK PHSLATPGTV
110 120 130 140 150
EPVSGRPSGS PWMTEPIHPC SPQGPALTLL LVDEACWLRT LPQAPTEAEA
160 170 180 190 200
NAEIHRKDDT LWCRVTKPVP AGGLLHVFLM AEPRGHPVKK EPAEPECPAP
210 220 230 240 250
VPTDIQLLPQ QAGMASILAS AVINKDVFPC KDCGIWYRSE RNLQAHLLYY
260 270 280 290 300
CASRQSAGSP ATAATEEKPK ESYPNERVCP FPQCRKSCPS ASSLEIHMRS
310 320 330 340 350
HSGERPFVCL ICLSAFTTKA NCERHLKVHT DTLSGVCHSC GFISTTRDIL
360 370 380 390 400
YSHLVTNHMV CQPGSKGEIY SPGAGHPAAK LPPDGLASIQ QHSAPHGPRA
410 420 430 440 450
SGDLGLAPAP SPGQDRKVLA EATNGEARVA PQNGGGSETP AAPRSIKVEA
460 470 480 490 500
VEEPEAARAP GPGEPGAQAL SRTPSPHSPA AARVKAELSS PTPGSSPGPG
510 520 530 540 550
ELGLAGALFL PHYVFGPDAG APSGAPQASE ILAKMSELVH SRLQQGAGVA
560 570 580 590 600
GTPAGLFAGA KGATCFECEI TFNNVNNFYV HKRLYCSGRR PPEDTPAARR
610 620 630 640 650
PKTIPGPPRA TPGPPAEPEA TRSSPGPGTR EDDAGDAATP EAEAAGRGSE
660 670 680 690 700
GSQSPGSSVD DAEDDPSRTL CEACNIRFSR HETYTVHKRY YCASRHDPPP
710 720 730 740 750
RRPPAPPSAL DSPEGRAPRS PSPPAPNADP ADLGTTTPSK GPPAPAASSH
760 770 780
RYCRLCNIRF SSLSTFIAHK KYYCSSHAAE HVK
Length:783
Mass (Da):82,574
Last modified:November 22, 2017 - v2
Checksum:i4033E6E9C2C86F61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01083469 Genomic DNA. No translation available.
AGTP01083470 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSTOT00000029846; ENSSTOP00000018113; ENSSTOG00000027139.

Similar proteinsi

Entry informationi

Entry nameiI3N167_ICTTR
AccessioniPrimary (citable) accession number: I3N167
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: November 22, 2017
This is version 31 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported