Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

ZFPM1

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ZFPM1Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000018113.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini226 – 259CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini281 – 310C2H2-typeInterPro annotationAdd BLAST30
Domaini311 – 338C2H2-typeInterPro annotationAdd BLAST28
Domaini561 – 594CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini667 – 700CCHC FOG-typeInterPro annotationAdd BLAST34

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiI3N167.
OMAiDGALWCR.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 6 hits.
SUPFAMiSSF57667. SSF57667. 4 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 3 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.

Sequencei

Sequence statusi: Complete.

I3N167-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAREEEAQA TESSLTGQEA TAPELQAAGG PRPPSPPGTD TDPPPEPTTP
60 70 80 90 100
TSPGGPEEME EQEPETGSQE AAAAAASPWS GPEELELVLR DGRRCVQARL
110 120 130 140 150
SLAEGLSWGP FQGSIQTRAS SPRPAEPGPA LTLLLVDEAC WLRTLPQAPT
160 170 180 190 200
EAEANAEIHR KDDTLWCRVT KPVPAGGLLH VFLMAEPRGH PVKKEPAEPE
210 220 230 240 250
CPAPVPTDIQ LLPQQAGMAS ILASAVINKD VFPCKDCGIW YRSERNLQAH
260 270 280 290 300
LLYYCASRQS AGSPATAATE EKPKESYPNE RVCPFPQCRK SCPSASSLEI
310 320 330 340 350
HMRSHSGERP FVCLICLSAF TTKANCERHL KVHTDTLSGV CHSCGFISTT
360 370 380 390 400
RDILYSHLVT NHMVCQPGSK GEIYSPGAGH PAAKLPPDGL ASIQQHSAPH
410 420 430 440 450
GPRASGDLGL APAPSPGQDR KVLAEATNGE ARVAPQNGGG SETPAAPRSI
460 470 480 490 500
KVEAVEEPEA ARAPGPGEPG AQALSRTPSP HSPAAARVKA ELSSPTPGSS
510 520 530 540 550
PGPGELGLAG ALFLPHYVFG PDAGAPSGAP QASEILAKMS ELVHSRLQQG
560 570 580 590 600
AGVAGTPAGL FAGAKGATCF ECEITFNNVN NFYVHKRLYC SGRRPPEDTP
610 620 630 640 650
AARRPKTIPG PPRATPGPPA EPEATRSSPG PGTREDDAGD AATPEAEAAG
660 670 680 690 700
RGSEGSQSPG SSVDDAEDDP SRTLCEACNI RFSRHETYTV HKRYYCASRH
710
DPPPRRPPAP
Length:710
Mass (Da):74,592
Last modified:July 11, 2012 - v1
Checksum:iC458A683B0E2470A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01083470 Genomic DNA. No translation available.
AGTP01083471 Genomic DNA. No translation available.
AGTP01083472 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSTOT00000029846; ENSSTOP00000018113; ENSSTOG00000027139.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiI3N167_ICTTR
AccessioniPrimary (citable) accession number: I3N167
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: July 5, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported