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Protein
Submitted name:

Family with sequence similarity 196 member B

Gene

FAM196B

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Family with sequence similarity 196 member BImported
Gene namesi
Name:FAM196BImported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili423 – 443Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IMEG. Eukaryota.
ENOG4111HWX. LUCA.
GeneTreeiENSGT00530000063787.
InParanoidiI3MRQ3.
OMAiTEGRNFY.
OrthoDBiEOG091G05WS.
TreeFamiTF333465.

Family and domain databases

InterProiView protein in InterPro
IPR029337. FAM196.
PANTHERiPTHR28682. PTHR28682. 1 hit.
PfamiView protein in Pfam
PF15265. FAM196. 1 hit.

Sequencei

Sequence statusi: Complete.

I3MRQ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQPTMKVRP VLLKRNSLES VELVKPPHHR RSKSQQVRFK DDGTTKNPTG
60 70 80 90 100
LAEADTQAPE DPTGMGKTPA PKHHHPPAYS LSFPRSQKAG GVRNIAIQTS
110 120 130 140 150
PSLRKHFPVF KRKKLTASKS LVEMPTAPPS AIQVNGNLSE QDIVSSDLAY
160 170 180 190 200
LRLAQHLEDG PRRVKVSHPF LPRVSKVQSN GPLSICLEAG SWRASEKAAA
210 220 230 240 250
AIQVPDDFYH GPSWEARAST LSPGESTERS NSIPPLIDVC PGEGRRVLIS
260 270 280 290 300
DSERSPSGLA ATSGASYPPG TEKLKHELLL PKDNCEDRDL GLLSSQSKDT
310 320 330 340 350
CVPSSPQTHS SPAPGSHSQP THPERDSDCP ASDDSHQDLG ACKTSSASKS
360 370 380 390 400
APGCKEQPAK NPTQPDTLEF QNCPGNNPLP SSLPRSESKP QSNREISDIN
410 420 430 440 450
QIHLARGELC DLQGRLQSVE ESLHSNQEKI KVLLNVIQDL EKARALTEGR
460 470 480 490 500
NFYRTGQDLN NCSTCQNTAC IIYSVEYDFR QQEGRFHEVL QSLEEVEPVE
510 520 530
ETSSPPKSPA EPPAPEKQDL RRKTKKVKRK CFWWI
Length:535
Mass (Da):58,768
Last modified:July 11, 2012 - v1
Checksum:iC5EE08E62C331E32
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01075514 Genomic DNA. No translation available.
RefSeqiXP_005334191.1. XM_005334134.1.

Genome annotation databases

EnsembliENSSTOT00000016524; ENSSTOP00000014788; ENSSTOG00000016521.
GeneIDi101957170.

Similar proteinsi

Entry informationi

Entry nameiI3MRQ3_ICTTR
AccessioniPrimary (citable) accession number: I3MRQ3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: March 28, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported