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Protein
Submitted name:

Makorin ring finger protein 3

Gene

MKRN3

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri95 – 122C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri247 – 274C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri403 – 432C3H1-typePROSITE-ProRule annotationAdd BLAST30

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Makorin ring finger protein 3Imported
Gene namesi
Name:MKRN3Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000005440.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini95 – 122C3H1-typeInterPro annotationAdd BLAST28
Domaini247 – 274C3H1-typeInterPro annotationAdd BLAST28
Domaini320 – 374RING-typeInterPro annotationAdd BLAST55
Domaini403 – 432C3H1-typeInterPro annotationAdd BLAST30

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri95 – 122C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri247 – 274C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri403 – 432C3H1-typePROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1039. Eukaryota.
ENOG410XRM0. LUCA.
GeneTreeiENSGT00390000014093.
InParanoidiI3M785.
OMAiSEDQWDL.
OrthoDBiEOG091G07DG.
TreeFamiTF315108.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
4.10.1000.10. 2 hits.
InterProiView protein in InterPro
IPR026294. Makorin_3.
IPR031644. MKRN1_C.
IPR018957. Znf_C3HC4_RING-type.
IPR000571. Znf_CCCH.
IPR036855. Znf_CCCH_sf.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
PANTHERiPTHR11224:SF38. PTHR11224:SF38. 1 hit.
PfamiView protein in Pfam
PF15815. MKRN1_C. 1 hit.
PF00097. zf-C3HC4. 1 hit.
SMARTiView protein in SMART
SM00184. RING. 1 hit.
SM00356. ZnF_C3H1. 3 hits.
SUPFAMiSSF90229. SSF90229. 2 hits.
PROSITEiView protein in PROSITE
PS50103. ZF_C3H1. 3 hits.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.

Sequencei

Sequence statusi: Complete.

I3M785-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEAAAPFKT CEADGAEAGA EAAGEGVSGP GLPGFEVSGE SATLGVNPPD
60 70 80 90 100
VPSGLASFPV APGPAHPGTE AVGHAQAAGG GANPNPLPEP NNGAWRKQIV
110 120 130 140 150
CRYYLHGQCK EGENCRYSHD PSVRQMAREG HVSPPEASAD RGPSMAAAAP
160 170 180 190 200
AAAAAQSEPP TQEVAEAPPA ASSSSLPLIG WAAERGFFEA ETDNAGLEAA
210 220 230 240 250
GGAGAQGWEG AVEFVPGQPY RGRMVPPYGP EAPLQRPVPE REQMAVGMGM
260 270 280 290 300
QLCRYAARGR CFNGESCFYL HGDICDMCGL RALHPVDAAQ REAHISACME
310 320 330 340 350
AHERDMELSF AVQRSMDKVC GICMEVVYEK ANPCDRRFGI LYNCNHTFCI
360 370 380 390 400
QCIRRWRSVR QFENRISKSC PQCRVPSSFV TPSEFWVEDE EEKEKLIQRY
410 420 430 440 450
KEGMRKKDCR YFAHGRGYCP FGENCFYKHT YHWGHHRRGG GPSGIYWHQV
460 470 480 490 500
LEPVRVSESN MLFKSSKKEL VIRCLANLLF KRFLAMRVGF PFSDDQWAWL
510
YYQMEEYFNF NP
Length:512
Mass (Da):56,349
Last modified:July 11, 2012 - v1
Checksum:i3445B03DA58F1DDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01108846 Genomic DNA. No translation available.
RefSeqiXP_005340623.1. XM_005340566.1.

Genome annotation databases

EnsembliENSSTOT00000006080; ENSSTOP00000005440; ENSSTOG00000006095.
GeneIDi101978456.

Similar proteinsi

Entry informationi

Entry nameiI3M785_ICTTR
AccessioniPrimary (citable) accession number: I3M785
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 25, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported