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Protein
Submitted name:

FMR1 autosomal homolog 2

Gene

FXR2

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
FMR1 autosomal homolog 2Imported
Gene namesi
Name:FXR2Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000005075

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 60Agenet-likeInterPro annotationAdd BLAST47
Domaini73 – 125Agenet-likeInterPro annotationAdd BLAST53

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili212 – 232Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IF9J Eukaryota
ENOG410ZDJG LUCA
GeneTreeiENSGT00390000017033
InParanoidiI3M6H4
OMAiHTTRTYG
OrthoDBiEOG091G08EZ
TreeFamiTF105427

Family and domain databases

Gene3Di3.30.1370.10, 2 hits
InterProiView protein in InterPro
IPR008395 Agenet-like_dom
IPR022034 FXMRP1_C_core
IPR032172 FXR_C1
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
PfamiView protein in Pfam
PF05641 Agenet, 1 hit
PF12235 FXMRP1_C_core, 1 hit
PF16096 FXR_C1, 1 hit
PF00013 KH_1, 2 hits
SMARTiView protein in SMART
SM00322 KH, 2 hits
SUPFAMiSSF54791 SSF54791, 2 hits
PROSITEiView protein in PROSITE
PS51641 AGENET_LIKE, 2 hits

Sequencei

Sequence statusi: Complete.

I3M6H4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGLSSGGDV EPGLPVEVRG SNGAFYKGFV KDVHEDSVTI FFENNWQSER
60 70 80 90 100
QIPFGDVRLP PPADYNKEIT EGDEVEVYSR ANEQEPCGWW LARVRMMKGD
110 120 130 140 150
FYVIEYAACD ATYNEIVTLE RLRPVNPNPL ATKGSFFKVT MAVPEDLREA
160 170 180 190 200
CSNENVHKEF KKALGANCIF LNITNSELFI LSTTEAPVKR ASLLGDMHFR
210 220 230 240 250
SLRTKLLLMS RNEEATKHLE TSKQLAAAFQ EEFTVREDLM GLAIGTHGAN
260 270 280 290 300
IQQARKVPGV TAIELGEETC TFRIYGETPE ACRQARSYLE FSEDSVQVPR
310 320 330 340 350
NLVGKVIGKN GKVIQEIVDK SGVVRVRVEG DNDKKNPREE GMVPFIFVGT
360 370 380 390 400
RENISNAQAL LEYHLSYLQE VEQLRLERLQ IDEQLRQIGL GFRPPGSGRG
410 420 430 440 450
GSSDKAGYTT DESSSSSLHT TRTYGGSYGG RGRGRRTGGP AYGPSSDPST
460 470 480 490 500
ASETESEKRE EPSRAGPGDR DPPTRGEESR RRPIGGRGRG PPPAPRPTSR
510 520 530 540 550
YNSSSISSVL KDPDSNPYSL LDTSEPEPPV DSEPGEPPPA SARRRRSRRR
560 570 580 590 600
RTDEDRTVMD GGLESDGPNM TENGLEEESR PQRRNRSRRR RNRGNRTDGS
610 620 630 640 650
ISGDRQPVTV ADYISRAESQ SRQRPPLERT KPSEDSLSGQ KGDSVSKLPK
660 670
GPSENGELSA PLELGSLVNG VS
Length:672
Mass (Da):74,205
Last modified:July 11, 2012 - v1
Checksum:i234AEF9893F56402
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01070907 Genomic DNA No translation available.
AGTP01070908 Genomic DNA No translation available.
RefSeqiXP_005332874.1, XM_005332817.1

Genome annotation databases

EnsembliENSSTOT00000005671; ENSSTOP00000005075; ENSSTOG00000005657
GeneIDi101957164

Similar proteinsi

Entry informationi

Entry nameiI3M6H4_ICTTR
AccessioniPrimary (citable) accession number: I3M6H4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: March 28, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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