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Protein
Submitted name:

Vacuolar protein sorting 25 homolog

Gene

VPS25

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Vacuolar protein sorting 25 homologImported
Gene namesi
Name:VPS25Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000003402.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG4068. Eukaryota.
ENOG4111F6Y. LUCA.
GeneTreeiENSGT00390000014892.
InParanoidiI3M302.
OMAiPPFFTIQ.
OrthoDBiEOG091G0PIU.
TreeFamiTF317731.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.10.570. 1 hit.
InterProiView protein in InterPro
IPR008570. ESCRT-II_cplx_vps25-sub.
IPR014041. ESCRT-II_cplx_Vps25-sub_N.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PANTHERiPTHR13149. PTHR13149. 1 hit.
PfamiView protein in Pfam
PF05871. ESCRT-II. 1 hit.
SUPFAMiSSF46785. SSF46785. 2 hits.

Sequencei

Sequence statusi: Complete.

I3M302-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMSFEWPWQ YRFPPFFTLQ PNVDTRQKQL AAWCSLVLSF CRLHKQSSMT
60 70 80 90 100
VMEAQESPLF NNVKLQRLSL NLKPGKLPVE SIQIVLEELR KKGNLEWLDK
110 120 130 140 150
NKSSFLIMWR RPEEWGKLIY QWVSRSGQNN SVFTLYELTN GEDTENEEFH
160 170 180
GLDEATLLRA LQALQQEHKA EIITVSDGRG VKFF
Length:184
Mass (Da):21,597
Last modified:July 11, 2012 - v1
Checksum:i9E05876222A19EDB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01023513 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSTOT00000003796; ENSSTOP00000003402; ENSSTOG00000003805.

Similar proteinsi

Entry informationi

Entry nameiI3M302_ICTTR
AccessioniPrimary (citable) accession number: I3M302
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 25, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported