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Protein
Submitted name:

Cytochrome P450 family 2 subfamily W member 1

Gene

CYP2W1

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMonooxygenaseUniRule annotation, Oxidoreductase
LigandHemeUniRule annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome P450 family 2 subfamily W member 1Imported
Gene namesi
Name:CYP2W1Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_501177472821 – 490Sequence analysisAdd BLAST470

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000002682.

Structurei

3D structure databases

ProteinModelPortaliI3M1I0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome P450 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0156. Eukaryota.
COG2124. LUCA.
GeneTreeiENSGT00900000140799.
InParanoidiI3M1I0.
OMAiDYRDPVF.
OrthoDBiEOG091G0BT8.
TreeFamiTF352043.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiView protein in InterPro
IPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
IPR036396. Cyt_P450_sf.
PfamiView protein in Pfam
PF00067. p450. 1 hit.
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiView protein in PROSITE
PS00086. CYTOCHROME_P450. 1 hit.

Sequencei

Sequence statusi: Complete.

I3M1I0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALLLLGLLV LLGLWGLLRA SARSPSPALR WPPGPRPLPL LGNLHLLSVS
60 70 80 90 100
QQDRSLMELS KRYGPMFTVH LGCQKTVVLS GYEAVREALV GTGQELADRP
110 120 130 140 150
PIPIFQLIQQ GGGIFFSSGA RWRAARQFTV RVLHSLGVGQ APMADKVLQE
160 170 180 190 200
LACLMGQLDS YGGRPFPLAL LGWAPSNITF ALLFGQRFDY QDTMFVSLLG
210 220 230 240 250
LIDEVMVLLG SPSLQLFNIY PWLGTLLQLH RPVLRKIEEV RVILRTLLQA
260 270 280 290 300
RASPTPQGGP VRSYVDALIQ QGQGDDQEGL FAEDNAVACV LDMVMAGTET
310 320 330 340 350
TSATLQWAIL LMAKYPGVQG RVQEELGHVL GPGRLPRPED QRVLPYTNAV
360 370 380 390 400
LHEVQRYITL LPHVPRCTAA DTQLGGYLLP KGTPVIPLLT SVLLDKTQWE
410 420 430 440 450
TPDQFNPGHF LDADGHFVKR AAFLPFSTGR RVCVGESLAR MELFLLFAGL
460 470 480 490
LQRYRLLPPS GISPTALDAT PAPAFTMRPR AHTLRAVPWP
Length:490
Mass (Da):53,836
Last modified:November 22, 2017 - v2
Checksum:i4D2D08990BDD1C44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01103410 Genomic DNA. No translation available.
RefSeqiXP_005339899.1. XM_005339842.1.

Genome annotation databases

EnsembliENSSTOT00000003003; ENSSTOP00000002682; ENSSTOG00000003002.
GeneIDi101970215.

Similar proteinsi

Entry informationi

Entry nameiI3M1I0_ICTTR
AccessioniPrimary (citable) accession number: I3M1I0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: December 20, 2017
This is version 35 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported