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Protein
Submitted name:

Cytochrome P450 family 2 subfamily W member 1

Gene

CYP2W1

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMonooxygenaseUniRule annotation, Oxidoreductase
LigandHemeUniRule annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome P450 family 2 subfamily W member 1Imported
Gene namesi
Name:CYP2W1Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 31HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000002682.

Structurei

3D structure databases

ProteinModelPortaliI3M1I0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome P450 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0156. Eukaryota.
COG2124. LUCA.
GeneTreeiENSGT00900000140799.
InParanoidiI3M1I0.
OMAiDYRDPVF.
OrthoDBiEOG091G0BT8.
TreeFamiTF352043.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiView protein in InterPro
IPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
IPR036396. Cyt_P450_sf.
PfamiView protein in Pfam
PF00067. p450. 1 hit.
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiView protein in PROSITE
PS00086. CYTOCHROME_P450. 1 hit.

Sequencei

Sequence statusi: Complete.

I3M1I0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AQRGTGALPP AVHMALLLLG LLVLLGLWGL LRASARSPSP ALRWPPGPRP
60 70 80 90 100
LPLLGNLHLL SVSQQDRSLM ELSKRYGPMF TVHLGCQKTV VLSGYEAVRE
110 120 130 140 150
ALVGTGQELA DRPPIPIFQL IQQGGGIFFS SGARWRAARQ FTVRVLHSLG
160 170 180 190 200
VGQAPMADKV LQELACLMGQ LDSYGGRPFP LALLGWAPSN ITFALLFGQR
210 220 230 240 250
FDYQDTMFVS LLGLIDEVMV LLGSPSLQLF NIYPWLGTLL QLHRPVLRKI
260 270 280 290 300
EEVRVILRTL LQARASPTPQ GGPVRSYVDA LIQQGQGDDQ EGLFAEDNAV
310 320 330 340 350
ACVLDMVMAG TETTSATLQW AILLMAKYPG VQGRVQEELG HVLGPGRLPR
360 370 380 390 400
PEDQRVLPYT NAVLHEVQRY ITLLPHVPRC TAADTQLGGY LLPKGTPVIP
410 420 430 440 450
LLTSVLLDKT QWETPDQFNP GHFLDADGHF VKRAAFLPFS TGRRVCVGES
460 470 480 490 500
LARMELFLLF AGLLQRYRLL PPSGISPTAL DATPAPAFTM RPRAHTLRAV
Length:500
Mass (Da):54,712
Last modified:July 11, 2012 - v1
Checksum:i4A81BDFE716F5B14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01103410 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSTOT00000003003; ENSSTOP00000002682; ENSSTOG00000003002.

Similar proteinsi

Entry informationi

Entry nameiI3M1I0_ICTTR
AccessioniPrimary (citable) accession number: I3M1I0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 25, 2017
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported