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Protein
Submitted name:

Lymphocyte antigen 6 family member H

Gene

LY6H

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Lymphocyte antigen 6 family member HImported
Gene namesi
Name:LY6HImported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_501179191126 – 140Sequence analysisAdd BLAST115

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000001705

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 124UPAR/Ly6InterPro annotationAdd BLAST99

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J4NS Eukaryota
ENOG41117ZV LUCA
GeneTreeiENSGT00730000111458
InParanoidiI3LZF6
OrthoDBiEOG091G0VTU
TreeFamiTF337757

Family and domain databases

InterProiView protein in InterPro
IPR016054 LY6_UPA_recep-like
PfamiView protein in Pfam
PF00021 UPAR_LY6, 1 hit
SMARTiView protein in SMART
SM00134 LU, 1 hit

Sequencei

Sequence statusi: Complete.

I3LZF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPAAMRSLG LALLALLLCP APAHGLWCQD CTLTTNSSHC TPKQCQPSDT
60 70 80 90 100
VCASVRITDP SSSRKDHSVN KMCASSCDFV KRHFFSDYLM GFINSGILRV
110 120 130 140
DVECCGKDLC NQAAAVGCSP WALAGGLLLS LGPALLWAGP
Length:140
Mass (Da):14,800
Last modified:November 22, 2017 - v2
Checksum:i7D9E874978DA13D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01001215 Genomic DNA No translation available.
RefSeqiXP_005316162.1, XM_005316105.2

Genome annotation databases

EnsembliENSSTOT00000001912; ENSSTOP00000001705; ENSSTOG00000001914
GeneIDi101967512

Similar proteinsi

Entry informationi

Entry nameiI3LZF6_ICTTR
AccessioniPrimary (citable) accession number: I3LZF6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 28 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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